KEGG   Rhodanobacter thiooxydans: LRK53_04365
Entry
LRK53_04365       CDS       T08065                                 
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
  KO
K01710  dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
Organism
rth  Rhodanobacter thiooxydans
Pathway
rth00521  Streptomycin biosynthesis
rth00523  Polyketide sugar unit biosynthesis
rth00525  Acarbose and validamycin biosynthesis
rth00541  Biosynthesis of various nucleotide sugars
rth01100  Metabolic pathways
rth01110  Biosynthesis of secondary metabolites
rth01250  Biosynthesis of nucleotide sugars
Module
rth_M00793  dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:rth00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00541 Biosynthesis of various nucleotide sugars
    LRK53_04365 (rfbB)
  09109 Metabolism of terpenoids and polyketides
   00523 Polyketide sugar unit biosynthesis
    LRK53_04365 (rfbB)
   01055 Biosynthesis of vancomycin group antibiotics
    LRK53_04365 (rfbB)
  09110 Biosynthesis of other secondary metabolites
   00521 Streptomycin biosynthesis
    LRK53_04365 (rfbB)
   00525 Acarbose and validamycin biosynthesis
    LRK53_04365 (rfbB)
Enzymes [BR:rth01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.1  Hydro-lyases
    4.2.1.46  dTDP-glucose 4,6-dehydratase
     LRK53_04365 (rfbB)
SSDB
Motif
Pfam: GDP_Man_Dehyd Epimerase RmlD_sub_bind Polysacc_synt_2 NAD_binding_4 3Beta_HSD adh_short NAD_binding_10 KR NmrA
Other DBs
NCBI-ProteinID: UJJ55638
LinkDB
Position
complement(1011965..1013035)
AA seq 356 aa
MNESSTRSKTLLITGGAGFIGANFVLQAVADGLRVINLDKLTYAGNPDTLASLQGNGRHV
FVHGDIGDRALVAKLLAEHRPDAIVNFAAESHVDRSIDGPAEFVQTNVVGTLGLLECARD
YWRGLEGGAHEAFRFLHVSTDEVYGSLGAEGKFTETTPYAPNSPYSASKAASDHLVRAFH
HTYGLPVLTTNCSNNYGPYQFPEKLIPLVTAKALAGEPLPVYGDGLNVRDWLFVGDHCSA
IRRVLDAGRVGETYNVGGNAERENITVVKTICSLLDACRPLADGRPRESLITYVRDRPGH
DRRYAIDSSKLQNELGWRPSQTFETGIAQTVDWYLANQPWVQRVLDGSYRMERLGS
NT seq 1071 nt   +upstreamnt  +downstreamnt
atgaacgaatcatccacgaggagcaagaccttgctgatcaccggcggggccggcttcatc
ggcgccaatttcgtgctgcaggcggtggccgacggcctgcgcgtgatcaacctcgacaag
ctcacctatgccggcaatccggacacgctggcgtcgctgcagggcaacgggcggcatgtg
ttcgtgcatggcgatatcggcgatcgcgcgctggtggcgaagctcctggctgagcaccgg
cccgatgccatcgtgaatttcgccgccgagtcgcacgtggaccgttcgatcgacggcccg
gccgagtttgtgcagaccaacgtggtcggcacgctgggcctgctggaatgcgcccgcgac
tactggcgcggcctggaaggcggcgcccacgaggcgttccgtttcctgcacgtgtccacc
gacgaggtgtacggctcgcttggcgccgagggcaagttcaccgagaccacgccatacgcg
ccgaactcgccgtactccgcgtcgaaggccgcctccgaccatctggtgcgagcgttccac
cacacttacggcctgccggtgctgaccaccaactgctccaacaactacgggccctaccag
ttcccggagaagctcatcccgctggtgaccgccaaggcgctggctggagaaccactgccg
gtgtacggcgacggcctgaacgtccgtgactggctgttcgtcggcgaccactgcagcgcg
atccgtcgcgtgctggatgccggccgcgtcggcgaaacctacaacgtgggcggcaatgcc
gagcgcgagaacatcaccgtggtgaagactatctgcagcctgctcgatgcatgccggccg
ctggccgacggccgcccacgcgaatcgttgatcacctacgtgagggatcgccccggccac
gaccgccgctatgcgatcgattccagcaagctgcagaacgagctgggctggcggccctcg
caaacctttgaaaccggcatcgcacaaacggtggattggtacctcgcaaaccagccgtgg
gtgcagcgcgtgctcgacggcagctaccgcatggagcgactcggttcatga

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