Rhodanobacter thiooxydans: LRK53_04885
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Entry
LRK53_04885 CDS
T08065
Symbol
dgoD
Name
(GenBank) galactonate dehydratase
KO
K01684
galactonate dehydratase [EC:
4.2.1.6
]
Organism
rth
Rhodanobacter thiooxydans
Pathway
rth00052
Galactose metabolism
rth01100
Metabolic pathways
rth01120
Microbial metabolism in diverse environments
Module
rth_M00552
D-galactonate degradation, De Ley-Doudoroff pathway, D-galactonate => glycerate-3P
Brite
KEGG Orthology (KO) [BR:
rth00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
LRK53_04885 (dgoD)
Enzymes [BR:
rth01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.6 galactonate dehydratase
LRK53_04885 (dgoD)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MR_MLE_C
MR_MLE_N
Motif
Other DBs
NCBI-ProteinID:
UJJ55729
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Position
complement(1135556..1136704)
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AA seq
382 aa
AA seq
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MKITRLTTFLVPPRWLFLRIDTDAGICGWGEPVVEGRAHTVATAVDELSDYLVGKDPRHI
EDLWNVMYRGSFYRGGPVLMSAIAGVDQALWDIKGKHLGVPVHELLGGPVRERIRVYSWI
GGDRPADTARAARAAVDRGFTAVKMNGTEEMHFIDSHAKVERVLANVQAVREAVGPHIGL
AVDFHGRVHKPMAKVLVRELAPYKLMFIEEPVLSEHLDAIPELANITSAPIALGERLYTR
YDFKRVLQMGGVDVIQPDPSHAGGITETRKIAAMAEAYDVALALHCPLGPIALAANLQLD
AVCHNAFIQEQGLGIHYNAANDLLDYVADRNVFAYKDGYVAIPGGPGLGIEINEAYVIER
AKVGHRWRNPLWRHDDGSVAEW
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcacccgactcactacgttcctggtgccgccgcgctggctgttcctgcgcatc
gacaccgatgccggcatctgcggctggggcgagccggtggtggaaggccgcgcacacacc
gtggccaccgcggtcgacgaactttccgattacctggtcggcaaggacccacgccatatc
gaggatctgtggaatgtgatgtaccgcggcagcttctatcgcggcggccccgtcctgatg
agtgccatcgccggcgtcgaccaggcgctgtgggacatcaagggcaagcatctcggcgta
ccggtgcacgagttgctaggcggtccggtgcgcgagcgtatccgcgtgtattcgtggatt
ggcggcgaccgcccggcggacacggccagggcagccagggccgcggtcgaccgcggcttc
accgcggtcaagatgaatggcaccgaagagatgcacttcatcgacagtcacgccaaggtc
gagcgcgtgctggcgaacgtgcaggccgtgcgcgaggctgtcggcccgcacatcggcctg
gctgtcgatttccacggtcgcgtgcacaagccgatggccaaggtactggtgcgggaactg
gcgccgtacaagctgatgtttatcgaggaacccgtactttccgagcatctggatgcgatt
ccggagctcgccaatatcacctcggcaccgatcgcgctgggggaacggctgtatacgcgc
tatgacttcaagcgcgtgctgcagatgggtggcgtcgacgtcatccagcccgacccctcg
catgccggcggcatcaccgaaacacgcaagatcgcggccatggccgaggcctacgacgtg
gcgcttgcattgcactgcccgctcggtccaatcgcgttggcggcaaatctccagctcgac
gcggtgtgccacaacgccttcatccaggagcagggcctgggcatccattacaacgctgcc
aacgatctgctcgactacgtggccgaccgcaatgtatttgcctataaggacggctacgtc
gcgattcccggcggcccgggcctcggcatcgagatcaacgaagcctacgtcatcgagcgc
gccaaggtcggccaccgctggcgcaatccgctgtggcgccacgacgacggcagcgtcgcc
gaatggtga
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