Rhodanobacter thiooxydans: LRK53_04935
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Entry
LRK53_04935 CDS
T08065
Name
(GenBank) AAA domain-containing protein
Organism
rth
Rhodanobacter thiooxydans
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_11
AAA_12
MTES_1575
DUF4011
AAA_30
AAA_19
Peptidase_M48
SLFN-g3_helicase
MeaB
Viral_helicase1
RhiE-like_linker
TerB
DUF3638
nSTAND3
PH_28
Motif
Other DBs
NCBI-ProteinID:
UJJ55738
LinkDB
All DBs
Position
1150343..1155913
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AA seq
1856 aa
AA seq
DB search
MALTAAQYALPEPEAVRRQLLGRAVRLTEAMAPKAIMAAVEIRDAFGLTSPVEIYQSAGR
ENAAMHLLREPILMEIQGRLLSLLDDGALRAVIGHEFGHFIAHGPDSPHAQVSALATSLA
LAEDAPVELALVASTLSMARELTADRYALLATRDLDALLRLEMVATTGLPAEDLGGDTAG
YLAQCCELVEACLAEGDSAQGVTHPEHGVRAWAAWLFSETTLYRELTGCGPGTRTLDEVD
ALIERVLRRPGLDGAFQYLEPPPAELHELALAAAVLVSMADDNLSDEEAEVLERTFASLV
PDWRRLLDPAQAAQRVEELAPLAKAWGSSFLRPLFNLLIHVLTADGVADEREFARVMEIG
RLLGGEELFGTLMRTVLRRITVERREESAAKPLPVRARDAAQALDVYLAAIWRRGGSQTT
LRQLLRLVGETRREGAVLARLAAALEHAGLSTSVDVATVDLDGTIALSPRHAAATVTPPP
PLPQDALLRAIQRLRDELISGDGRSPSVRLREVRVGRAFDLAALSRISVGHADRCLTLAQ
DARRVVLVQAEQAGESKEAASLLRQLVELRREHLARREETGARDLHLGVGFVRGVVNGYV
VRAPLLLYPVELEPDGIGGIALVHVADEPPVANQALLRLIHLKANLPFADDQAVKLDALA
ADAGRGVVALADHLRQIGMDIFEIDAALHTLDPLDDDTVAWKGCRLELEACAVIGLFPQS
RSELLHDYEQLLAEIDSPGADVHASLGCASALLPASLRTDHAAEPAAIESTAQAPTLVIA
ADPSQVDVVRMAGNTRAMVVDGPPGTGKSQVIVNLVADALARGERVAVVSEKRAALDVVA
QRLAGIGFGALVGVVHDVVDDRKALFRKIHDRLESRANRPAAPASTAEDVVQLTGRLRPR
IAHTRHSTAGEPPLGKLATYAAGIADTVPQTMPPLAGLPFGGALKLAKLAQACRPWADLM
VSDSPWRPSVTHQRRSLAGSTREARAAFAESLMQAVRTAAAVEAAAVRQGVAPATSESHM
EELLRAHKALTSLKEVDALAAALLEFPDDRRAPLLALRADWMSASEAWQAHPAPVRVDAT
PAFEQCVQALLTQGTSFLRYLSPGWWKARGTIKRQLADVWPDALGRPIDATLLHDLHRRL
RLARLWASFDQTAARTGLARVLVGDAGQVAQSLQRVADIAEPVHCLVRVRNALTTLDAWA
AGDAKAWRQTVFDRLAAAQAWRKHVVASHAAAEIFHDLTPSTPAAELGIRHRVFAQHADR
AAELDRHLAEALTVDACGPLAIAACADASSSAWSDLLLKAWAIGCVQAAHDALPGALRSG
EVDDNVTRQLNEALEAQAQASRHRVLDGADAAPLLAMPVAEKYARRTPAQAARDKLQHEV
AKQRGLMPLRSFVHSYAVQGLFDTLPVWLLSPETLVVLFPRQPVFDVVIFDEASQCTVAN
GFPALLRARRVVIAGDDRQMPPTAFFKATRDEGETDSEEETEPADFLTSESLLTLARLRM
PARRLDWHYRCQDEDLIAFSNHAMYGGALLTCPASSRPPVPASLRWIAVADAKYEGGRND
VEAERVVDLVGELLARPQPPTIGIVTFNLSQRLAILDAIDRRRSSQEEFARLYGAAEALE
RLDDRPFVKNIESVQGDERDVIVFSLGHAPVERVHKTRGVQHYVPARFGPLGQRGGERRL
NVAVSRARQEAVVVASFDPGQLSVARAKNDGPRLFKAYLEYVHHMSGGDRSLAAHVLDVV
RAAASPSVSSAQGVLPGFVPLAGQLIEALFAKGIEASAHVGASRFKVDVAAEGEVAGRAY
RVAILCDEGDTDDGAYRRTQRASLLRRRGWHVVHVDGIEWLTDRNAVLMRIERAMA
NT seq
5571 nt
NT seq
+upstream
nt +downstream
nt
gtggccctgacggcagcgcaatacgcgttgcccgagcccgaggcggtgcgccgccagttg
ctgggacgggccgtgcgactcaccgaagcaatggcgcccaaggccatcatggcggcagtc
gagatccgggacgcgttcgggctgacttcgccggtcgagatctaccagtctgccggccgc
gaaaacgcggccatgcacctcttgcgcgagccgatcctgatggagatccaggggcggctt
ttgtccctgctcgacgatggcgccctgcgtgcggtgatcggtcatgagttcggccacttc
atcgcgcacgggccggactcgccgcatgcacaggtgagtgcgctggccacgtcgctggcg
ctggccgaagacgcgccggtggagcttgcgctggtcgcctccactctttcgatggcgcgc
gaattgactgccgatcgctacgctctgctcgccacgcgggatctggatgcgctgctgcgc
ctggaaatggtggcgaccactggcttgcccgcggaagacctcggcggcgatacagccggc
tatctcgcccagtgttgcgagctggtggaggcgtgcctcgcggagggtgacagtgcgcag
ggcgtcacccaccccgaacacggcgtgcgtgcctgggccgcgtggttgttcagcgagacc
acgctgtatcgcgagttgaccggttgcggtcccggcacgcgcacgctcgacgaggtggat
gccctgatcgagcgcgtattgcgccggcccgggctggacggcgcgttccagtacctggag
ccaccgcccgcggaactgcacgagctggcgctggcggctgccgtgctggtgtcgatggct
gatgacaacctgagcgatgaagaggccgaggtgctggaacgcacctttgcctcgctggtg
cccgactggcgtcgcctgctcgatccggcacaggcggcacaacgcgtcgaggagcttgcg
ccgctggccaaggcttggggctcgtcgttcctgcgtccattgttcaacctgctgatccac
gtactcacggccgacggcgtagcggacgagcgcgagttcgcgcgtgtcatggagatcggc
cgcttgcttggcggcgaggagttgtttggtacgttgatgcgaacggtgctccgccggatc
accgtggaacgccgtgaggagagcgccgccaagccgctgccagtgcgcgcccgtgatgcc
gcgcaggcgctggatgtttatctcgccgccatctggcggcgcggtgggtcgcagaccacc
ttgcgccagctgttgcgcctggtgggcgaaacgcgccgtgagggtgctgtgctcgcgcgg
ctcgcggcggcgctggaacacgccggcctttccacgtcagtcgatgtcgcgacggtcgac
ctggatggaaccattgcgttgtcgcccaggcacgcagcggcaaccgtgacaccgccgccg
cccttgccgcaggatgcgttgctgcgcgccatccagcgcctgcgcgacgagctcatcagc
ggcgacgggcgcagcccatcggtgcggctgcgcgaagtgcgcgtcggtcgtgcgttcgat
ctcgccgcactgtcgcgtatctcggtaggacatgcggatcgctgcctgacattggcacag
gacgcccgccgcgtggtgctggtgcaggcggaacaggctggcgagtcaaaggaggccgcc
agtctcctgcgccagcttgtcgaactgcggcgcgagcacctggcgcggcgtgaggagacc
ggtgcgcgcgacctgcatctcggcgtcggtttcgtgcgcggcgtggtgaacggttatgtg
gtgcgcgcacccctgctgttgtatccggtggaactggagccggacggcatcggcggtatc
gcgctggtgcatgtggccgatgagccaccggtcgccaaccaggcactgttgcggctcatc
catctcaaggcgaacctgccttttgccgacgatcaggcagtcaagctcgacgcactggcg
gccgacgccggccggggcgtggtggcgctggccgatcacctgcgccagatcggcatggac
attttcgagatcgatgccgcactgcatacgctcgacccgctcgatgacgacacggttgcc
tggaagggttgccgacttgagctcgaagcctgcgccgtcatcggtctgttcccccagtcc
cgctccgaactgctgcacgactatgagcaactgctcgctgaaatagactcccccggtgcg
gatgtgcatgcgtcgctgggttgcgccagtgcactcttgccggcatccctgcgcacggat
catgcggcggagccggctgcgatcgagtcaactgcgcaggctccgacgctggtgattgcc
gccgatccctcgcaggtggatgtggtgcgcatggcgggcaatacacgcgccatggtcgtc
gatggcccaccagggaccggcaagagccaggtgatcgtgaacctggtggcggatgcgctc
gcacgcggtgagcgcgtggcggtggtatcggagaaacgcgcggcgctggacgtggttgcc
cagcgcctggcggggatcggcttcggcgctctggttggcgtggtgcacgacgtggtcgat
gaccgcaaggcgctgtttcgcaagatccacgaccggctggagtcgagggcaaaccgccct
gctgcgcctgcgtctaccgcggaggacgtcgtgcaattgactggccggctgcgtccgcgc
atcgcgcacacgcgccattcgactgcaggcgagccaccgctgggcaagctggccacctac
gccgccggcattgccgataccgtgccccaaaccatgccgccgctggcaggccttccgttt
ggcggcgcgctcaagctggcgaagctggcgcaggcttgccggccctgggccgatttgatg
gtgtcggacagtccgtggcgcccctcggtgacacaccagcgccgctcgctggccgggagt
acgcgcgaagcacgcgcggccttcgccgaatcgctcatgcaggcggtgcgcacggctgct
gccgtggaagcagcagcagtgcgccaaggtgtcgcgcccgccaccagcgagtcgcacatg
gaagaactgctgagagcacacaaggcgctcacctccctcaaggaggtcgacgccctggcg
gcggctctgttggaatttcctgacgatcgccgcgcacccttgctcgccttgcgggcggac
tggatgagcgcatcggaagcgtggcaggcccatcccgcgccggtgcgcgtcgatgccacg
ccggcgttcgagcagtgcgtacaggcgcttttgactcaaggcacctcgttcttgcgttac
ctgtcgccgggctggtggaaggcgcgtggcaccatcaagcgccagctggcggacgtctgg
ccggatgccttgggtcgaccgatcgacgccaccttgttgcacgacctgcatcggcggctg
cgactggcgcgactgtgggcgagtttcgaccagaccgccgcccggaccggacttgcacgg
gtgctcgtcggcgacgccggacaggttgcccaatccttgcagcgcgtagccgacatcgcc
gaacctgtgcactgtctggtgcgcgttcgcaacgcgttgacaacactggacgcatgggct
gccggcgatgcgaaagcatggcggcagacagtattcgaccgtctggccgcggcgcaggca
tggcgcaaacatgtcgtggccagtcacgccgctgccgagattttccatgacctgactccg
agcaccccggctgcagagcttggtatccggcatcgcgtcttcgcacagcacgccgaccgc
gccgccgaactggatcgacacctcgccgaggccttgactgtggatgcatgtggtcccctg
gcgattgccgcctgcgctgacgcctcgtccagtgcatggtcggaccttctgctgaaggcg
tgggcaatcggttgcgtgcaggcggcacacgatgcgttaccgggtgccttgcgcagcggc
gaagtggacgacaacgtcactcgccaactgaatgaagcgcttgaagctcaggcgcaggca
tcccgccaccgcgtgctcgatggtgcggacgcggcacccctgcttgccatgcccgtagcc
gaaaagtacgcgcggcgcacgcccgcgcaggctgcccgcgacaaactgcaacacgaagtg
gccaagcagcgcggcctgatgccgctgcgcagtttcgtacacagctatgcggtgcaaggc
ttgttcgacacgttgccggtatggctgctgtcgccggaaacgctggtcgtgttgtttccg
cgccagccggtgttcgatgtggtgatcttcgatgaggcgtcgcagtgcaccgtcgccaac
ggttttcccgcgctgctgcgtgcgcggcgcgtggttatcgcgggtgacgaccggcagatg
ccgcccaccgccttcttcaaggccacgcgcgacgagggtgaaacggactccgaagaagaa
acggaaccagccgatttcctcacctcggaatcgctgctgacgctcgcccgtttacgcatg
ccggcacggcggctcgactggcattatcgctgccaggacgaggacctgattgcgttctcc
aaccatgcgatgtacggaggcgcgctgctcacctgtcccgcttcgtcccggccaccggta
ccggccagcctgcgctggattgcggtagccgatgcaaagtacgagggcggacgcaacgat
gtcgaagccgagcgcgtggtggacctcgttggggaactgttggcccggccgcagccaccg
acgatcggcatcgtgactttcaacctctcgcagcgcctggccatacttgacgccattgac
cggcgacgttcatcgcaagaggagttcgctcgcctgtacggagcggccgaagcgcttgag
cggctcgacgaccgccccttcgtcaagaatatcgaaagcgtgcagggcgatgagcgcgac
gtgatcgttttctcgctaggccatgcgccggtggaacgcgtgcacaagacacgcggtgtg
cagcattacgtgccggcgcggttcgggccgctgggccagcgtggtggcgagcgtcgcctg
aacgtggccgtctcgcgtgcacgtcaggaagccgtcgtggtcgcctcattcgatcctggt
caattaagcgtggcgcgtgcgaagaacgacggcccacgcctgttcaaggcctatctggag
tatgtccaccacatgtccggcggcgatcgctcgctcgccgcgcatgtgctggacgtggtg
cgcgccgcagcgagtccgtccgtcagtagcgcgcagggggttctgccgggcttcgtgccg
cttgccggccaactgatcgaggcgttgttcgcgaagggcatcgaggccagcgcgcatgtg
ggcgcttcgcgcttcaaggtggatgtggcggctgagggcgaagtcgccgggcgggcgtat
cgcgtggcgattctttgtgatgagggcgacaccgacgatggtgcatatcgtaggacccag
cgggcttccctgttgcgtcggcgcggctggcacgtagtgcacgtcgatggtatcgaatgg
ctgaccgatcggaatgcggtcctcatgcgaatcgagcgagccatggcgtag
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