Rhodanobacter thiooxydans: LRK53_04990
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Entry
LRK53_04990 CDS
T08065
Name
(GenBank) sigma-54 dependent transcriptional regulator
KO
K02667
two-component system, NtrC family, response regulator PilR
Organism
rth
Rhodanobacter thiooxydans
Pathway
rth02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
rth00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
LRK53_04990
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
rth02022
]
LRK53_04990
02035 Bacterial motility proteins [BR:
rth02035
]
LRK53_04990
Two-component system [BR:
rth02022
]
NtrC family
PilS-PilR (type 4 fimbriae synthesis)
LRK53_04990
Bacterial motility proteins [BR:
rth02035
]
Pilus system
Twitching motility proteins
LRK53_04990
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
AAA_lid_14
HTH_8
AAA_5
HTH_50
AAA_16
Mg_chelatase
HTH_28
AAA_19
VpsR
FleQ
Motif
Other DBs
NCBI-ProteinID:
UJJ55745
LinkDB
All DBs
Position
complement(1170923..1172311)
Genome browser
AA seq
462 aa
AA seq
DB search
MNPQTVLVIDDERDIRELLTITLGRMDLQVDAVGTVAEARRALAERSYDLCFTDMRLPDG
TGHEIIELIAAEHPDMPVAMITAYGNVDAAVNALKAGAFDFVSKPVDIQMLRGLVRTALR
LAEERRSGAAAAKTGDSSRLIGDSSAMQQVRATIAKLARNQAPVYIAGESGVGKELVARL
IHEQGPRASGPFVPVNCGAIPSELMESEFFGHRKGSFTGASTDKEGLFQAAQGGTLFLDE
VAELPLHMQVKLLRAIQEKAVRPIGGRDEIPVDARILSATHKNLGQLVEQGQFRQDLFYR
INVIELRVPPLRERRGDVSQLSAFILKALAGKSGESVGQLSPSARGALEAYDFPGNVREL
ENILERAMAMCDGSTIEAADLMLPQRSARPSHEPAAPGQPSAPAAAASTGADGGLDDYIS
NLERTAIVKALEESRYNKTAAARKLGITFRALRYKLKKLGID
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgaatccccagaccgttttggtcatcgacgatgaacgcgacatccgcgaactgctgacc
atcacgctgggacggatggacctgcaggtcgacgccgtcggcaccgtcgccgaggcacgc
cgcgcactggccgaacgcagttacgacctttgcttcaccgacatgcggctgcccgacggc
accggccacgaaatcatcgaactgattgccgcggagcatcccgacatgccggtggcgatg
atcaccgcctacggcaacgtcgacgccgcagtgaacgcgctgaaggccggcgcattcgat
ttcgtctccaagccggtcgacatccagatgctgcgcgggctggtgcgcaccgcgctgcgt
ctggccgaggaacggcgcagcggcgccgccgccgcgaagaccggcgactccagccgcctg
atcggcgactccagcgccatgcagcaggtgcgcgccaccatcgccaagctggcgcgcaac
caggcgccggtgtacatcgccggcgaatccggtgtaggcaaggagctggtggcgcgactg
atccacgagcagggcccgcgcgccagcggcccgttcgtgccggtcaactgcggcgcgatc
ccgtccgagctgatggaaagcgagttcttcggccaccgcaagggcagcttcaccggcgcc
agcaccgacaaggaaggcctgttccaggccgcccagggcggcacgctgtttctcgacgag
gtggccgagctgccgctgcacatgcaggtgaagctgctgcgtgcgatccaggaaaaggcg
gtgcgcccgatcggcggccgcgacgagatcccggtcgacgcgcgcatcctgtcggccacc
cacaagaacctcggccagctggtcgagcagggccagttccgccaggacctgttctaccgc
atcaacgtgatcgagctgcgcgtgccgccgctgcgcgaacgccgcggcgacgtgtcgcag
ctgtccgcgttcatcctcaaagcactggccggcaagagtggggaaagcgtcggccagctg
tcgccgtccgcccgcggcgcgctggaagcctacgacttccccggaaacgtgcgcgagctg
gagaacatcctcgaacgcgcgatggcgatgtgcgacggcagcaccatcgaggcggccgac
ctgatgctgccgcagcgcagcgcgcggcccagccacgaaccggcggcaccgggacagccg
tcggcacccgccgcggccgccagcaccggcgcggacggcggcctcgacgactacatcagc
aacctcgagcgcaccgccatcgtcaaggcgctggaggaatcgcgctacaacaagaccgcc
gccgcccgcaaactcggcatcaccttccgcgcgctgcgctacaagctgaagaagctaggc
atcgactaa
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