Rhodanobacter thiooxydans: LRK53_05030
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Entry
LRK53_05030 CDS
T08065
Symbol
sucD
Name
(GenBank) succinate--CoA ligase subunit alpha
KO
K01902
succinyl-CoA synthetase alpha subunit [EC:
6.2.1.5
]
Organism
rth
Rhodanobacter thiooxydans
Pathway
rth00020
Citrate cycle (TCA cycle)
rth00640
Propanoate metabolism
rth00660
C5-Branched dibasic acid metabolism
rth00720
Other carbon fixation pathways
rth01100
Metabolic pathways
rth01110
Biosynthesis of secondary metabolites
rth01120
Microbial metabolism in diverse environments
rth01200
Carbon metabolism
Module
rth_M00009
Citrate cycle (TCA cycle, Krebs cycle)
rth_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
rth00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
LRK53_05030 (sucD)
00640 Propanoate metabolism
LRK53_05030 (sucD)
00660 C5-Branched dibasic acid metabolism
LRK53_05030 (sucD)
09102 Energy metabolism
00720 Other carbon fixation pathways
LRK53_05030 (sucD)
Enzymes [BR:
rth01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.5 succinate---CoA ligase (ADP-forming)
LRK53_05030 (sucD)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CoA_binding
Ligase_CoA
Succ_CoA_lig
CoA_binding_2
GFO_IDH_MocA
KARI_N
Motif
Other DBs
NCBI-ProteinID:
UJJ55753
LinkDB
All DBs
Position
1186373..1187245
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AA seq
290 aa
AA seq
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MSVLVNKNTKVIVQGFTGQQGTFHAQQCLDYGTQVVGGVTPGKGGSQHIGLPVFNSVDEA
VLETGADASVIFVPPPFAADSILEAIDAGIKVIVAITEGIPVLDMLRVKNVLAQHPETIL
IGPNCPGIITPGECKIGIMPGQIHSKGRVGVVSRSGTLTYEAVFQTTNEGLGQSTVIGIG
GDPINGLNFIDCLKLFQDDAQTEGIIMVGEIGGSAEEDAAEFIGEYVTKPVVSFIAGASA
PAGKRMGHAGAIISGGKGTAAAKFAALEKAGVTTVKSPADLGKALAKLMK
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atgagcgttttggtcaacaaaaacaccaaggtgatcgtgcagggcttcaccggccagcag
ggcaccttccatgcacagcagtgcctcgactacggcacccaggtggtcggcggcgtcacc
ccgggcaagggtggctcccagcacatcggcctgccggtgttcaactcggtcgatgaagcg
gtgctcgaaaccggcgccgacgcgtcggtgatcttcgtaccgccgccgtttgcggccgac
tcgatcctcgaagcgatcgacgccggcatcaaggtgatcgtggcgatcaccgaaggcatc
ccggtgctggacatgctgcgcgtgaagaacgtgctggcgcagcacccggaaaccatcctg
atcgggccgaactgccccggcatcatcacccccggcgaatgcaagatcggcatcatgccc
ggccagatccacagcaagggcagggtcggcgtggtctcacgctccggcacgctcacctat
gaagcggtgttccagaccaccaacgaaggcctcggccagagcacggtgatcggcatcggc
ggcgacccgatcaacggcctgaatttcatcgactgcctgaagctgttccaggacgacgcg
cagaccgagggcatcatcatggtcggcgagatcggcggcagcgccgaggaagacgccgcc
gagttcatcggcgagtacgtgaccaagccggtggtgtcgttcatcgctggcgcctcggct
ccggccggcaagcgcatgggtcatgccggcgcgatcatctccggcggcaagggcaccgcc
gcggcgaagttcgccgcgctggagaaggctggcgtcaccacggtgaagtcgccggccgac
ctgggcaaggcgctcgccaagctgatgaagtag
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