Rhodanobacter thiooxydans: LRK53_05410
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Entry
LRK53_05410 CDS
T08065
Symbol
ribB
Name
(GenBank) 3,4-dihydroxy-2-butanone-4-phosphate synthase
KO
K14652
3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:
4.1.99.12
3.5.4.25
]
Organism
rth
Rhodanobacter thiooxydans
Pathway
rth00740
Riboflavin metabolism
rth00790
Folate biosynthesis
rth01100
Metabolic pathways
rth01110
Biosynthesis of secondary metabolites
rth01240
Biosynthesis of cofactors
Module
rth_M00125
Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD
Brite
KEGG Orthology (KO) [BR:
rth00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00740 Riboflavin metabolism
LRK53_05410 (ribB)
00790 Folate biosynthesis
LRK53_05410 (ribB)
Enzymes [BR:
rth01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.4 In cyclic amidines
3.5.4.25 GTP cyclohydrolase II
LRK53_05410 (ribB)
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.12 3,4-dihydroxy-2-butanone-4-phosphate synthase
LRK53_05410 (ribB)
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GFIT
Motif
Pfam:
DHBP_synthase
GTP_cyclohydro2
Motif
Other DBs
NCBI-ProteinID:
UJJ55821
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All DBs
Position
1261984..1263075
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AA seq
363 aa
AA seq
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MAFNTIPEILEDIRAGRMVVILDDEDRENEGDLIMAAQMVRPEDVNFMVREARGLLCLTL
TEQRTRQLGLRPMVSDNTSAYHTNFTVSIEAAEGVTTGISAHDRARTIQVAVKSDAKPQD
LSQPGHIFPLTAQPGGVLTRAGHTEAGCDLAALAGLEPSAVLIEILHEDGSMARRPELEI
FARKHGLKIGSIAELIRYRLETEKTVQRVHEEAVETEFGPFRLVAYRDAIRRGLHYALVR
GKVDDGAPALTRVHVRNTLSDVLHLKRDDLGLTVTAALRRIADEDRGVLLVLSGEDTPEA
LLARLSRQPGKQAPEEAQQQEWRQLGLGAQILADLGVHRLRVLGTPRKLVGLGGFGLEVV
EYV
NT seq
1092 nt
NT seq
+upstream
nt +downstream
nt
atggctttcaataccattcccgaaatcctcgaagacatccgcgccggccgcatggtggtg
atcctcgacgacgaggaccgcgagaacgaaggcgacctgatcatggccgcgcagatggtg
cggcccgaggacgtgaacttcatggtgcgcgaggcgcgcggcctgctgtgcctcacgctg
accgagcagcgcacgcgccagctcggcctgcgcccgatggtcagcgacaacacctcggcc
taccacaccaacttcaccgtctcgatcgaggcggccgagggtgttaccaccggcatctcg
gcgcacgaccgtgcacgcacgatccaggtcgcggtgaagtcggacgcgaagccgcaggac
ctgtcgcagcccggccacatcttcccgctcaccgcacagccgggcggcgtgctgacccgc
gccggacataccgaagccggttgcgacctggccgcactggctgggctggaaccctcggcg
gtgctgatcgagatcctgcacgaggacggttcgatggcgcgccggccggagctggagatc
ttcgcgcgcaagcacggcctgaagatcggttccatcgccgagctgatccgctatcgcctc
gaaaccgagaagaccgtgcagcgcgtgcacgaggaagcggtggagaccgagttcggtccg
ttccggctggtggcctaccgcgatgcgatccgtcgcggcctgcactacgcgctggtgcgc
ggcaaggtcgacgatggcgcgccggcactgactcgcgtgcacgtgcgcaacaccttgtcc
gacgtgctgcacctgaagcgcgacgacctcggcctcacggtcactgcggcattgcgccgg
atcgccgacgaggaccgcggcgtgctgctggtgctgtccggtgaggacacgcccgaagcg
ctgctggcccggctcagccgccagccgggcaagcaggcgccggaggaagcgcagcagcag
gaatggcgccagctcggcctcggcgcgcagatcctggccgacctcggcgtgcaccgcctg
cgcgtgctgggcacgccgcgcaagctggtggggctgggcggtttcgggctcgaagtggtc
gaatacgtctaa
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