Rhodanobacter thiooxydans: LRK53_05570
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Entry
LRK53_05570 CDS
T08065
Name
(GenBank) proline--tRNA ligase
KO
K01881
prolyl-tRNA synthetase [EC:
6.1.1.15
]
Organism
rth
Rhodanobacter thiooxydans
Pathway
rth00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
rth00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
LRK53_05570
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
rth01007
]
LRK53_05570
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rth03016
]
LRK53_05570
Enzymes [BR:
rth01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.15 proline---tRNA ligase
LRK53_05570
Amino acid related enzymes [BR:
rth01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
LRK53_05570
Transfer RNA biogenesis [BR:
rth03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
LRK53_05570
Prokaryotic type
LRK53_05570
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
tRNA_edit
HGTP_anticodon
Motif
Other DBs
NCBI-ProteinID:
UJJ55852
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All DBs
Position
complement(1299662..1301359)
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AA seq
565 aa
AA seq
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MRLSQFHLATVKEVPADAEIASHQLMLRAGMIRKLASGLYTWSPLGLRVLRKVENIVREE
MDRAGAIEMLMPSVQPRELWEETGRWEKFGGQLLKIKDRKGQEFCYGPTHEEVVTDFARN
ELKSYKQLPVNFYQIQTKFRDEIRPRFGVMRAREFLMKDAYSFHLSQDSLAETYAAMYQA
YVRIFTRLGLTFRAVQADTGAIGGNASHEFQVLADSGEDAIAFSDGSDYAANLEKAEALA
PTTARPAPAAALQRVDTPTQKTIGDVAGFLKVSPQQCVKTLLLRGRDGLVALCLRGDHEV
NEVKAGKLAELPGEPVLASEEEILAATGTRPGFIGPVGLPASIPLVVDRDAAVLTDFVCG
GNADRTHFTGANWERDARITRVADLRNVVEGDLSPDGQGVLHLARGIEVGHVFQLGTKYA
EALGATVVDETGKPQVMTMGCYGIGVSRIVAAAIEQRHDDAGILWPEAMAPWRVAVCVIN
PKNSPAVSAAAEALYQTLGQRGIEAVLDDRGVRAGSMFADIELIGIPHRVVVSERGFAAG
TLEYRARGDAESRSLNEEQLFALLG
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atgcgcctcagccaattccacctggccaccgtcaaggaagtccccgccgacgccgaaatc
gccagccaccagctgatgctgcgcgctggcatgatccgcaagctcgcctccggcctgtac
acctggagcccgctgggcctgcgcgtgctgcgcaaggtggaaaacatcgtgcgcgaggaa
atggatcgcgccggcgcgatcgaaatgctgatgccttcggtgcagccgagggaattgtgg
gaagaaaccggccgctgggagaaattcggcggccagctgctgaaaatcaaggatcgcaag
ggccaggaattctgctacggcccgacccatgaggaagtggttaccgatttcgcccgcaac
gagctgaaaagctacaagcagctgccggtcaatttctaccagatccagaccaagttccgc
gatgagatccgcccgcgtttcggcgtgatgcgtgcgcgcgaattcctgatgaaggacgct
tattcgttccacctgagccaggactcgctggccgaaacctacgccgccatgtaccaggct
tacgtgcgcattttcacccgcctggggttgaccttccgcgcggtgcaggccgataccggc
gcgatcggcggcaatgccagccacgaattccaggtgctggccgattccggcgaggatgcc
atcgcgttttccgacggctccgattacgccgcgaatctcgaaaaggccgaggcactggcg
ccgaccaccgcacgtcccgctcccgccgccgccctgcagcgggtcgacacgcccacccag
aaaaccatcggcgacgtcgccggtttcctcaaggtcagcccgcagcaatgcgtaaagacc
ctgctgctacgcggccgcgacggcctggtcgcgctgtgcctgcgcggcgaccacgaggtc
aacgaggtcaaggccggcaagctggccgaactgccgggcgagccggtgctcgccagcgag
gaggaaatcctcgccgccaccggcacgcgccccggtttcatcggcccggtcggcctgccg
gcgtcgatcccgctggtcgtcgaccgcgacgctgccgtgctgaccgacttcgtctgcggc
ggcaatgccgaccgtacgcacttcaccggcgcaaactgggagcgcgatgcgcgcatcacc
cgcgtcgccgacctgcgcaacgtggtcgagggcgacctgtcgcccgacggccagggcgtg
ctgcacctcgcccgcggcatcgaggtcggccacgtgttccagctgggcaccaagtacgcc
gaggcgctcggcgccaccgtggtggacgaaaccggcaagccgcaggtgatgaccatgggc
tgctacggcatcggcgtcagccgcatcgtcgccgccgccatcgagcagcgccacgacgac
gccggcatcctctggcccgaagcgatggcgccgtggcgggtggcggtgtgcgtgatcaac
ccgaagaactcgccggccgtcagcgcagcggccgaggcgctgtaccagacgctgggccag
cgcggcatcgaggcggtgctggacgaccgcggcgtgcgtgccggcagcatgttcgccgac
atagagctgatcggcattccgcaccgcgtggtggtcagcgagcgcgggttcgccgcgggc
acgctggaatatcgcgcgcgcggagacgccgaaagccgctcgctgaacgaggagcaattg
ttcgccctgctcggctga
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