Rhodanobacter thiooxydans: LRK53_05600
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Entry
LRK53_05600 CDS
T08065
Name
(GenBank) valine--tRNA ligase
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
rth
Rhodanobacter thiooxydans
Pathway
rth00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
rth00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
LRK53_05600
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
rth01007
]
LRK53_05600
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rth03016
]
LRK53_05600
Enzymes [BR:
rth01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
LRK53_05600
Amino acid related enzymes [BR:
rth01007
]
Aminoacyl-tRNA synthetase
Class I (U)
LRK53_05600
Transfer RNA biogenesis [BR:
rth03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
LRK53_05600
Prokaryotic type
LRK53_05600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
Val_tRNA-synt_C
tRNA-synt_1g
tRNA-synt_1_2
tRNA-synt_1b
Motif
Other DBs
NCBI-ProteinID:
UJJ55858
LinkDB
All DBs
Position
complement(1304528..1307491)
Genome browser
AA seq
987 aa
AA seq
DB search
MDKSFEPAQIESTWYARWEASGAFRPSGTGEPYCILLPPPNVTGTLHMGHAFQQTVMDML
VRYHRMRGFNTLWQVGTDHAGIATQKIVENQLAVEEKTRHDLGRDAFVERVWQWKEESGS
TITHQMRRIGAAADWSRERFTMDEGLSAAVRKVFIDWYRAGLIYRGNRLVNWDPLLGTAV
SDLEVNNVERDGHMWSIRYPVVGSDESVVVATTRPETMLGDVAVAVHPEDARYAHLVGRT
LKLPLTDREIPVIADDYVDREFGTGCVKITPAHDFNDYAIGQRHQLPPITIFTLDAKVND
NAPEKYRGLDRYDARKAVLADLEALGLLVETKPHKLQVPVSQRSDAVIEPMLTDQWFVDL
TSDVQQDGRPGGRKAITEPALDAVRNGDIKFVPENWSTTYTQWLDNIQDWCISRQLWWGH
RIPAWYDEAGNIFVGEDEADARAHADTAPVGALRQDEDVLDTWFSSALWPFSTMGWPADG
TVKNERGEVVANWANDQIFLPSAVLVTGFDIIFFWVARMVMATRYFTGRIPFREVYINAI
VRDAEGQKMSKSKGNTLDPLDLIDGIALEPLVEKSTKSLLIPQVRTKVEKRIRKDYPGGI
PAIGTDALRFTFAALASYSRTINFDIKRAEGYKAFCNKLWNAARFVLMNVSPLPAGEGGA
DAPGEGTGGARPSGITAPSPQPLSRGERGSAPVTEAERWILTRLAQTLTEAEEHFRTYRF
DHLAQALYEFVWNEYCDWFLELSKPALNGEDADAAASTRHTLLVVLEAVLRALHPVIPFL
TEEVWQEVAKVFVRSSMSAKNSPASLPDSSTKSILQSTYPRGADFAHDDAATAEIEWFKA
VLSGIRRIRSEMNIAPGKTIPLLLADGDSGDHARVAKFAAQIAFLARTEAPQWIEAGSAE
PAAAAAVVGTLRVLIPLAGLIDLDAEKARLAREIGRIEVEIKKCEGKLGNASFVANAPAE
VVAQERQRIADWNATLGALREQAQKLV
NT seq
2964 nt
NT seq
+upstream
nt +downstream
nt
atggacaagagtttcgaacccgcccagatcgagtcgacgtggtacgcgcgctgggaggcc
agcggtgcgttcaggccgtcgggcacgggtgaaccgtactgcatcctgctgccgccgccg
aacgtcaccggcacgctgcacatggggcatgcgttccagcagacggtgatggacatgctg
gtgcgctatcaccgcatgcgcggtttcaacacgctgtggcaggtcggcaccgaccatgcc
ggcatcgccacccagaagatcgtcgagaaccagctggcggtcgaggagaagacccgacac
gacctgggccgcgatgcgttcgtcgaacgcgtgtggcagtggaaggaggaatccggctcc
accatcacccaccagatgcgccgcatcggcgccgccgccgactggtcgcgcgagcgcttc
accatggacgagggactttcggctgcggtgcgcaaggtgttcatcgactggtatcgtgcc
gggttgatctaccgcggcaaccggctggtgaactgggatccgctgctgggcaccgccgtc
tccgatctcgaagtgaacaacgtcgagcgcgacggccacatgtggtcgatccgctacccg
gtggtgggcagcgacgagagcgtggtggtcgccaccacccgccccgagaccatgctgggc
gacgtcgccgtcgccgtgcatccggaggacgcgcgctacgcgcacctggtcggcaggacg
ctgaagctgccgctgaccgaccgcgagattccggtgatcgccgacgattacgtggaccgc
gagttcggcaccggctgcgtgaagatcaccccggcgcacgacttcaacgactacgcgatc
ggccagcgccaccagttgccgccgatcaccatctttacgctggacgcgaaggtcaacgac
aacgcaccggagaaataccgcggcctcgaccgctacgacgcgcgcaaggccgtgctggcg
gacctggaagcgctcggcctgctggtcgagaccaagccgcacaagctgcaggtgccggta
agccagcgctccgacgcggtgatcgagccgatgctcaccgaccagtggttcgtcgatctg
acgtcggacgtccagcaggatggacgccccggcggccgcaaggcaatcaccgagccggcg
ctggacgcggtgcgcaacggcgacatcaagttcgtgccggagaactggagcaccacctac
acgcagtggctggacaacatccaggactggtgcatcagccgccagctgtggtggggccac
cgcattccggcgtggtacgacgaggccggcaacatcttcgtgggcgaggacgaggccgac
gcgcgcgcgcatgccgacaccgcgccagtcggcgcgctgcgccaggacgaggacgtgctg
gacacctggttcagttccgcgctgtggccgttctccaccatgggctggccggccgacggc
acggtgaagaacgagcgcggcgaagtcgtggcgaactgggcaaacgaccagatcttcctg
cccagcgcggtgctggtcaccggcttcgacatcatcttcttctgggtcgcacggatggtg
atggcgaccaggtacttcaccggccgcatcccgttccgcgaggtctacatcaacgccatc
gtgcgcgatgcggaaggccagaagatgtccaagtccaagggcaacacgctggacccgctg
gacctgatcgacggcatcgcgctggagccgttggtggagaaatcgacgaagtcgctgctg
atcccgcaggtgcgcaccaaggtcgagaagcgcatccgcaaggattaccccggcggcatt
cccgcgatcggcaccgacgcgctgcgcttcaccttcgccgcgctggccagctacagccgc
acgatcaacttcgacatcaagcgcgccgaaggctacaaggcgttctgcaacaagttgtgg
aacgcggcacgcttcgtgctgatgaacgtttcccctctccctgcgggagagggtggcgcg
gatgcgccgggagagggtacgggcggagcgcggccttccggcatcaccgcaccctcgccc
caacccctctcccgaggggagaggggctcagcgccggttaccgaagcggagcggtggatt
ctgacgcggctggcgcagacgctgaccgaggcggaagaacatttccgcacgtaccgcttc
gaccacctggcgcaggcgctgtacgagttcgtgtggaacgagtattgcgactggttcctg
gaactctccaagcctgcgctgaacggcgaagacgccgacgcggcagcatccacgcggcac
acgctgctggtggtgctggaagcggtgctgcgcgcgctgcacccggtgattcccttcctc
accgaggaagtctggcaggaagtggcgaaagtattcgtgcgctcctccatgagcgcaaag
aacagcccggcatccctgccggactcttcaacaaagagcattctccagtccacgtatccg
cgcggcgcagacttcgcgcacgacgacgcagcgaccgccgagatcgaatggttcaaggcc
gtgctctcgggcatccgccggatccgctcggagatgaacatcgcgccgggcaagaccatc
ccgctgctgcttgccgacggcgacagcggcgatcacgcgcgcgtggcgaagttcgccgcg
cagatcgccttcctcgcccgcaccgaggcaccgcaatggatcgaagccggcagcgccgag
cccgccgcggccgcggccgtggtcggcacgctgcgcgtgctgattccgctggccggcctg
atcgaccttgatgccgaaaaggcgcgcttggccagggaaatcggccgcatcgaggtcgag
atcaaaaagtgcgagggcaagctcggcaacgccagcttcgtcgccaacgcaccggccgaa
gtggtggcgcaggaacgccagcgcatcgccgactggaacgccacgctgggcgcgctgcgc
gagcaggcgcagaagctggtctga
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