Rhodanobacter thiooxydans: LRK53_06490
Help
Entry
LRK53_06490 CDS
T08065
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
rth
Rhodanobacter thiooxydans
Pathway
rth03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
rth00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
LRK53_06490 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rth03021
]
LRK53_06490 (rpoA)
03400 DNA repair and recombination proteins [BR:
rth03400
]
LRK53_06490 (rpoA)
Enzymes [BR:
rth01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
LRK53_06490 (rpoA)
Transcription machinery [BR:
rth03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
LRK53_06490 (rpoA)
DNA repair and recombination proteins [BR:
rth03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
LRK53_06490 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
Motif
Other DBs
NCBI-ProteinID:
UJJ56019
LinkDB
All DBs
Position
1470782..1471780
Genome browser
AA seq
332 aa
AA seq
DB search
MAVSSTSVLRPRGLSVEQLGANRAKVVVEPLERGFGHTLGNALRRVLLSSIPGSAIVEVE
IDGVLHEYTTLEGLQEDVIEVLLNLKDVAIRQHSGDEVTLTLSKKGKGVVTAGDIVVDHS
VEIINPEHVICHLTKDIALNMRLKVRRGVGYQPASTRQHPDDEARPIGRLQLDASFAPVL
RVAYEVDAARVEQRTNLDKLVLDIETNGTIGAEDAVRKAAEIINDQLSVFGDFSRRESAT
DKAEKSGFDPLLLRPIDDLELTVRSADCLKAESIYYIGDLVQKTEVELLKTPNLGKKSLT
EIKDVLGGRGLALGMKLENWPPPGLSHGMQLG
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atggcagtttcgtcaactagcgtgctgcggccgcgtggcctcagcgtcgaacagctcggg
gccaaccgtgccaaggtggtggtcgagccgctcgagcgtggctttggccacaccctgggc
aacgcgctgcgtcgcgtgctgctctcctcgatccccggcagcgccatcgtcgaggtggaa
atcgatggcgtgctgcacgagtacaccaccctggaaggcctgcaggaggacgtgatcgaa
gtcctgctgaacctcaaggacgtggcgatccgtcagcacagcggcgacgaggtcaccctg
accctgtccaagaagggcaagggcgtggtcacggccggcgacatcgtcgtcgaccactcg
gtggagatcatcaatcccgagcacgtgatctgccacctgaccaaggacatcgccctcaac
atgcgcctgaaggtgcgtcgcggcgtcggctaccagccggccagcacgcgtcagcatccg
gatgacgaggcacgtccgatcggtcgcctgcagctggacgcgtcgttcgcgccggtgctg
cgcgtggcctacgaagtggacgccgcccgcgtcgagcagcgcaccaacctcgacaagctg
gtgctggacatcgagaccaacggtaccatcggtgccgaggacgcggtgcgcaaggccgcc
gagatcatcaacgaccagctgtcggtgttcggcgacttctcgcgtcgcgagagcgccacc
gacaaggcggaaaagagcggtttcgatccgctgttgctgcgtccgatcgacgatctggag
ctcaccgtgcgttcggcggactgcctgaaggccgagagcatctactacatcggcgacctg
gtgcagaagactgaggtcgagctgctgaagacgccgaacctgggcaagaagtcgctgact
gagatcaaagacgtgctgggcggtcgtggcctcgcgctgggcatgaagctcgagaactgg
ccgccgccgggcttgtcgcacggcatgcagctgggttga
DBGET
integrated database retrieval system
