Rhodanobacter thiooxydans: LRK53_07430
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Entry
LRK53_07430 CDS
T08065
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
rth
Rhodanobacter thiooxydans
Pathway
rth02024
Quorum sensing
rth03060
Protein export
rth03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
rth00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
LRK53_07430 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
LRK53_07430 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
LRK53_07430 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
rth02044
]
LRK53_07430 (ffh)
Enzymes [BR:
rth01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
LRK53_07430 (ffh)
Secretion system [BR:
rth02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
LRK53_07430 (ffh)
Eukaryotic Sec-SRP protein
LRK53_07430 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
Zeta_toxin
CbiA
AAA_22
cobW
AAA_16
AAA_33
AAA_26
AAA_30
T2SSE
AAA_14
AAA_31
KTI12
APS_kinase
NACHT
YqeC
ResIII
DnaB_C
AAA_19
ArsA_ATPase
Fer4_NifH
AAA_5
Helicase_RecD
Thymidylate_kin
AAA_24
nSTAND3
TsaE
6PF2K
Sigma54_activat
ATPase
ATP_bind_1
Mg_chelatase
AAA_28
DO-GTPase1
ATPase_2
SLFN-g3_helicase
ArlS_N
Motif
Other DBs
NCBI-ProteinID:
UJJ56196
LinkDB
All DBs
Position
1663146..1664525
Genome browser
AA seq
459 aa
AA seq
DB search
MFESLSQRLATTVNRLRGRGRLTEENIREALREVRIALLEADVALPVVQALIQRIKVRAV
GQDVIKSLSPSQALIKVVSDELTVVMGTANTELNLAQQPPAVVLMAGLQGAGKTTTVAKL
ARLLTERKKKKVMVVSCDVYRPAAIEQLRTLAEQVGVKFFPSATGQDPVQIAKDAIAAAR
REVVDVLLVDTAGRLHVDETMMAEIKALHAAITPIETLFVVDSMTGQDAANTAKAFNEAL
PLTGVILTKTDGDARGGAALSVRYVTGKPIKFLGAGEKTDALEPFHPDRLAQRILGMGDV
LSLVEEVERKVDQDKAQKLAQKVMKGKRFDLNDMRDQLEQMGNMGGLAGLMDKLPGVSSL
PDSVKSKVNDGEMRRMIAIIGSMTKKERRHPDLLNGSRRARVARGSGTQPADVNRLLKQY
MQMEKMMSKLSKGGSKGLLRQMRGAMKGMGGMGGLPPLR
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgttcgagtcgctcagccaacgccttgccaccaccgtcaaccgcctgcgcggccgcggc
cggctgaccgaagagaacatccgcgaagccctgcgtgaggtgcgcattgcgctgctggaa
gccgacgtggcgctgccggtggtgcaggcgctgatccagcggatcaaggtgcgcgcggtc
ggccaggacgtgatcaagagcctgtcgccgagccaggcgctgatcaaggtggtcagcgac
gagctgaccgtggtgatgggtaccgccaacaccgaactgaacctggcccagcagccgccg
gcggtggtgctgatggcgggcctgcagggcgccggcaagaccactacggtggccaagctg
gcgcggctgctgaccgagcgcaagaagaaaaaggtgatggtggtgagctgcgacgtctac
cgtccggccgcgatcgagcagctgcgcacgctggccgagcaggtcggggtgaagttcttc
ccgtccgcgacgggccaggatccggtgcagatcgcgaaggacgccatcgccgccgcgcgg
cgcgaggtggtcgacgtgctgctggtcgacaccgccggccgcctgcacgtggacgagacg
atgatggccgagatcaaggcgctgcatgccgcgatcacgccgatcgaaaccctgttcgtg
gtcgactcgatgaccggccaggacgccgccaacaccgccaaggcattcaacgaggcgctg
ccgctgaccggcgtgatcctcaccaagaccgacggcgatgcccgcggcggcgcggcactg
tcggtgcgctacgtcaccggcaagccgatcaagttcctcggcgccggcgagaagaccgac
gcactggagccgttccatccggaccggctggcccagcgcatcctcggcatgggcgacgtg
ctgagcctggtcgaggaggtcgagcgcaaggtcgaccaggacaaggcgcagaagctggcc
cagaaggtgatgaagggcaagcgcttcgacctgaacgacatgagggaccaactggagcag
atgggcaacatgggcggcctggccggcctgatggacaagctgccgggcgtgtccagcctg
ccggacagcgtcaagtccaaggtcaacgacggcgagatgaggcgaatgatcgcgatcatc
ggctcgatgacgaagaaggaacgtcgccacccggatctgctgaacggctcgcgccgcgcg
cgcgtggcgcgtggttcgggtacccagccggccgacgtcaaccgcctgctgaagcagtac
atgcagatggaaaagatgatgtccaagctgtccaagggtggcagcaagggcctgctgcgg
cagatgcgcggcgccatgaagggcatgggcggcatgggtgggctgccgccgctgcgctga
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