Rhodanobacter thiooxydans: LRK53_08125
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Entry
LRK53_08125 CDS
T08065
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
rth
Rhodanobacter thiooxydans
Brite
KEGG Orthology (KO) [BR:
rth00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rth02000
]
LRK53_08125
Transporters [BR:
rth02000
]
Other transporters
Pores ion channels [TC:
1
]
LRK53_08125
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
Motif
Other DBs
NCBI-ProteinID:
UJJ56324
LinkDB
All DBs
Position
1824265..1826973
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AA seq
902 aa
AA seq
DB search
MFYERNHLALAIGALLSAGFASTTFAQSTAAPPATNLEAVAVTGSHIKGAEISGVGPVTV
IDADEIARSGVVSVENLLQRLPASAGFAGNQTNAYWADNGYGTAQVNLRGLGINRTLVLL
NGRRIVNGGTGANSSADLNVIPVALIDRIEMLKDGASAIYGADAVAGVVNIITKKKFNGV
EASVRYGRTFQQDGDEKAVDLAWGMSSDRGSLMAAINYAETGEVNMADRAPCSFGEVGGK
LVCVGSSSTIGGRAVLADGRRVNFNQDPNGPANGYHTYSPARDNYNSNPYLNAVNPIKRL
SLSSFGNLALTEEVRVFTELMYTNRRSDQLATPGAIGIYRPIRIAADHPTNPTGQSLLLQ
RRRLQEAGPRNFYQEVDSFRAVVGLEGRIGTRWDWSAAVNWGRSTGIDGSTNIANLDRVD
QTLNTSICSNAAGAAIPCGNYLGYGNLTPRVLDYILFKSRDNGGNDQKSFTANLSGELFE
LPAGVVGVATGVEIRKERGWRDPDQLTVLGIANTNKQDPIAGEYTAKEAFAEVAVPLLQD
KFLAQSLNLSAAARYSSYDLFGNDSNYKVGLDWQMVPSLKLRANYATAFRIPNVPELFGG
VSEGNLTTTDPCNGWSKLPASSVVAQNCRASGVPAGYTQLGNTVLTTVGGNPKLQPEAAK
TMTAGVVWTPNFVNDLTVTLDYYKIKIDNAIQRIAGSTKLAVCYNTPGFSHPFCSASNFT
RNRQTGEIDFLSAQPVNAASERLSGVDLGAVYQFDLAGWKASLSADVSYLKNYDVKPFLG
ADDIHYAGKITGGRGSYAHWRSFTSLTMVRGPWSGSYSVQYIGAADDINASRGDIGDHAP
GLTYHNVQLKYVVNTFLDVAFGVDNLWDKQAPFIQSYTDANTDTMTYDLLGRRWNAKLTY
RW
NT seq
2709 nt
NT seq
+upstream
nt +downstream
nt
atgttctacgagcgcaatcaccttgcgctggctatcggcgcgctgttgtccgccggtttt
gccagcaccacctttgcccagtccaccgccgcgccgccggccaccaaccttgaggcggtc
gcagtgactggcagccacatcaagggagccgagatctccggcgtcggcccggtaaccgtc
atcgatgccgacgagatcgcgcgttccggcgtggtgtcggtggaaaatctgctccagcgg
ctgccggcctcggccggttttgccggcaaccagaccaatgcctattgggccgacaatggc
tacggcaccgcgcaggtgaacctgcgtggcctcggcatcaaccggacgctcgttctgctc
aacggccggcgtatcgtcaacggaggcaccggagccaacagctccgctgacctgaacgtc
attcccgtggcgctgatcgaccgcatcgagatgctgaaggatggtgcgtcggcgatctac
ggtgccgatgcggtggccggcgtggtcaacatcatcaccaagaagaagttcaacggcgtc
gaggcctcggttcgctacggccggaccttccagcaggacggcgacgagaaggcggtcgat
ctggcctgggggatgagctctgaccggggctcgttgatggcggcgatcaactacgccgaa
accggagaggtcaacatggcggatcgcgcgccgtgctcgttcggcgaagtcggcggaaag
ctcgtgtgcgtcggcagctcctcgacgatcggcggccgggccgttctggccgatggccgg
agagtcaatttcaatcaggaccccaacggcccggcgaatggctatcacacctactcaccg
gcgcgcgacaactacaattccaatccgtatctcaatgcggtcaatccgatcaagcgtttg
agcctcagttcgttcggcaatttggcgttgacggaggaggttcgtgtctttaccgaattg
atgtacacgaaccggcgttcggaccagctcgccacgccaggcgcgataggcatataccgc
ccgatccgtatcgcggctgatcacccgaccaacccgacgggtcagagcctcttgctgcag
cgcagaaggttgcaggaagcgggtccccgcaacttctatcaggaagtcgacagtttccgc
gcggtagtggggctggagggccggatcggtacccgctgggattggtcggcggcggtgaac
tgggggcgcagcaccggcatcgatggttccaccaacatcgccaatctggatcgcgtcgac
cagacgttgaacacgagcatctgcagcaatgcggcaggtgcagccattccctgcggcaac
tacctcggttacggcaacctgactcccagggtgctcgactacatccttttcaagagccgc
gacaacggcggcaacgaccagaagagtttcacggcgaacctcagcggtgagctgttcgaa
ctgccggccggcgtcgtcggcgtggcaaccggcgtggagattcgcaaggaacgcggctgg
cgcgacccggaccagctcacggtgctgggcatcgccaacaccaacaagcaggatccgata
gcgggcgaatacacggccaaggaagccttcgccgaagtcgcagttcccctgttgcaggac
aagttcctcgcgcagtcgctgaacctcagcgcggcagcgcggtattccagctacgacctg
ttcggcaacgacagcaactacaaggtcggcctggactggcagatggtgccgtcgctcaag
ctgcgcgcgaactacgccaccgctttccgcattcccaatgtgcccgagctcttcggcgga
gtgtcggagggcaatctgaccacgaccgatccctgcaacggctggagcaagctgccggcg
tcgtcggtggttgcgcagaactgccgcgcttccggcgtgccggccggctatacccagctg
gggaacacggtactgacgaccgttggcggcaacccgaaactgcagcccgaggccgcaaag
acgatgacggcgggagtggtgtggacgccaaacttcgtgaacgacctgacggtcacgctg
gactactacaagatcaagatcgacaacgcgatccagcgtatcgccggttcgaccaagctt
gcggtgtgctacaacacgcccggtttttcgcatccgttctgctcagcgtcgaacttcacc
cgcaatcggcagactggcgagattgatttcctttcggcccagccggtcaatgccgcgagt
gaaaggctctcgggcgtcgacctgggggcggtctaccagttcgatctggccggctggaag
gcgtccctcagcgcggacgtctcgtacctgaagaactacgacgtgaaaccgttcctgggt
gcggacgacatccactatgcggggaagatcaccggcggtcgcggcagctacgcgcactgg
cgttcgttcacttcgctgacgatggtgcgcgggccgtggtctggctcctacagcgtgcag
tacatcggcgccgccgacgacatcaacgcctcgcgcggcgatatcggcgaccacgcaccg
ggcttgacctatcacaacgtgcagctgaagtacgtggtgaacacgttcctcgacgttgct
ttcggcgtcgacaatctctgggacaagcaggcgccattcatccagagctataccgacgcg
aacaccgacaccatgacctacgacctgctcggtcggcgctggaacgcgaagctcacctac
cgctggtga
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