Rhodanobacter thiooxydans: LRK53_09025
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Entry
LRK53_09025 CDS
T08065
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
rth
Rhodanobacter thiooxydans
Brite
KEGG Orthology (KO) [BR:
rth00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rth02000
]
LRK53_09025
Transporters [BR:
rth02000
]
Other transporters
Pores ion channels [TC:
1
]
LRK53_09025
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
Motif
Other DBs
NCBI-ProteinID:
UJJ53152
LinkDB
All DBs
Position
2017004..2019352
Genome browser
AA seq
782 aa
AA seq
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MTRRVRGSKRPRLKMLAQCLAVSLVTASPTVFAQSTAPDQTPKDLQAIIVTARDQQEPLI
TVPESITTFSASSLNALDIRSFNDYATKTPNLSFNYGSGTTGISAARTIAIRGIGGQNLF
GAAGSTGFYIDDTPLPESIDPRIVDMERIEVLKGPQGTLFGQSSLGGTVRIITQKPDLSH
NDVGFMTQAGFTSGGGSPDKGGSVTGNLVVIPDEMAIRAVLFANHDAGYLTRTYPSPDSP
AVGDPFIAAPRTRVDDQGAQTTYGGSITTLLRVTPSFDATLRFLMQNTYFHGFPATFAPL
PSFKPAYQLDRAFDIQPSALDKWYLPSLDLRYHGDHYTLVSVTSYFDRHSRDIEDSTYGT
QQVMSGYYGVPSLPPQPFLWDQEHHQDQFSQELRWEFTDVFGAKGTLGAFYSKTHTTLSV
PPEYAQGLVAATADNTVVGPWPDNLLWIDRNPGMQEEKAIFGEIDVPLAERWTATLGARQ
YWLHQTSDFTAYGFNNFGATTSDPQSSHQSGLDPRLAIRYQATPNTLFYASASKGFRAGA
AQQYLPFCALPSLPADDITHLKSDTLWSYEVGAKTSIPDAGIFISASAYHIDWRNLQQQV
ALPCGAYFSINGRHAHIDGGEVEFNGRATEHLELRAGVGYERSRINDPGALSIVGITPGS
SVLGVPTWTATLAGVYTHPISRGWDGYLEADAGYTGSSRTLLNGGNGLFGTRDAYVLTNV
RVGVRHGPSDVSLNVHNAGNAKPNLGDIGYVGYAQYTQNGTIIPQVATLPPRTVLLEYRY
NY
NT seq
2349 nt
NT seq
+upstream
nt +downstream
nt
atgacacggcgcgtgcgcgggtccaagcggcctcgcctcaagatgcttgcccaatgcctc
gctgtctcgctggtcacggcgagccccaccgtctttgcccaaagcaccgcgcctgaccag
acgccaaaggacttacaggccatcatcgtgaccgcccgtgatcagcaggagccgttgatt
accgttcccgagagcatcacgaccttctcagcgtcgtccctcaatgcgctggatatccgc
tcgttcaacgattacgccaccaagacaccgaacctgtcgttcaactacggatcgggcact
accggcatttcagcggcgcgaaccattgcgatccgagggatcggcggacagaacctcttt
ggcgcggcgggttccaccggcttttatattgacgatacgccgctacccgaatcgatcgat
ccgcgcattgtcgacatggagcgcatcgaggttctgaaagggccgcagggcacgctattt
gggcaaagctcattgggcggcaccgtccgcatcattacccaaaagcccgacctgtcgcac
aacgacgtcggcttcatgacgcaagcaggattcacgtccggtggcgggagcccggataag
ggcggtagcgtgaccggcaatctcgtggtcattcccgacgaaatggccatccgcgccgtg
ctcttcgccaaccacgacgccggctacctgacgcgcacctatccctcacccgacagtcca
gccgtcggcgatccctttatcgctgccccgcgtacccgtgtggatgaccagggtgcgcaa
acgacgtacggcggatcgatcacaacgcttcttcgcgtcactccgtcgttcgatgcgacc
ttgcgcttcttgatgcagaacacctatttccacggctttcccgcgacctttgctcccctg
ccatccttcaagccggcgtatcagcttgaccgggccttcgatatccagcccagcgcgttg
gacaagtggtatttgccgtccctcgatcttcgctaccacggggatcactacacgttagtg
tcggtcaccagctactttgatcgccacagccgcgacatcgaggactccacctatggcacc
cagcaagtcatgagcggctactacggcgtgccatcgcttccgccacagcctttcctctgg
gaccaggaacaccaccaggatcagtttagccaggagcttcgatgggaattcacggacgtc
tttggcgccaagggcacgttgggcgcgttctattcgaagacccacaccacgctcagtgtg
ccgccagagtacgcgcaggggcttgtggcagccacggcggacaacaccgtggtgggtcct
tggccggacaaccttctttggatcgaccgcaacccgggcatgcaggaagagaaggcgatc
ttcggcgagatcgacgtaccgctcgccgagcgttggacggccaccctgggcgcccgacag
tattggctgcatcaaacgtccgacttcacagcgtatggcttcaacaacttcggagccacg
accagcgatccgcagtcgagccatcaatcgggtctcgaccccaggctcgcgatccgttat
caagctacgccaaacaccctgttctatgcgtcggcgtcgaaggggtttcgagccggcgcg
gcgcagcagtatctgccgttctgcgcgttgccgtcgttacccgccgatgacattacgcat
ctgaagtcagacacgctctggagctatgaagttggtgccaaaacgtcgattcccgatgca
ggcattttcatctcggcgtccgcctaccacatcgactggcgcaatctccaacagcaagtc
gccttgccttgtggcgcgtacttttccatcaacggccgccacgcgcacatcgacgggggt
gaagtcgagttcaacggacgcgccaccgagcacctcgagctacgcgccggcgtgggttac
gaacgcagccgcatcaacgaccctggcgcgctgtcgatcgtgggcatcacgcccggctcg
tcggtcctgggtgtgcctacctggacggcgacgctagcgggtgtctatacccatcctatt
tcgcggggctgggacggttacctggaagcggacgcgggctatacgggcagcagccggacg
ttgctgaacggtggcaacggtctgttcgggacgcgcgatgcttatgtgctcaccaacgtt
cgtgtcggcgtgcggcatgggccatcggatgtttccttgaatgtccacaatgccggtaac
gcgaaaccgaacctgggtgacatcggttacgtgggttatgcgcaatatacgcaaaatggc
acgatcatcccccaggtcgccaccctgccgccgcggacggtgctattggagtatcgctac
aactactga
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