Rhodanobacter thiooxydans: LRK53_09040
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Entry
LRK53_09040 CDS
T08065
Name
(GenBank) ABC transporter permease subunit
KO
K02053
putative spermidine/putrescine transport system permease protein
Organism
rth
Rhodanobacter thiooxydans
Pathway
rth02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rth00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
LRK53_09040
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rth02000
]
LRK53_09040
Transporters [BR:
rth02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
LRK53_09040
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BPD_transp_1
Motif
Other DBs
NCBI-ProteinID:
UJJ53155
LinkDB
All DBs
Position
2021706..2022503
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AA seq
265 aa
AA seq
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MSVRRVLASLLALALVAPPLLLGMLSVARQWRWPALWPTAWQVQQWHEVAGDLTGAGMMG
ALARSLALALTVAVVATALGLPTSRRVAGLPRRGAWLTALHLPYALSPVVLAVGLLFAFL
HLHLAGHLLGVLLAQLVFAYAYAVILLSALWTPRVAALEDLASTLGARRLQVWWRVLVPV
ARPMLAVCLFQTFLISWFDYALVRLIGQGEVQTLTIRLFEYFTSGDLRLAATCALILMTP
PLVTLLVHRAVPPSLLAPQAGSSHE
NT seq
798 nt
NT seq
+upstream
nt +downstream
nt
atgagcgttcgacgcgtgctggccagcctcctggccctggcgcttgtggctccgccgctg
ctattgggcatgctttccgtcgcccgccagtggcggtggcccgcgctgtggccgaccgcg
tggcaggtccagcaatggcacgaggtagccggggacctcactggcgccggcatgatgggc
gcgctggctcgctcgctcgccctggcactgacggtggctgtggtcgcgacggcgctcggc
ttaccgaccagtcgacgggtcgcgggcctcccgcggcgcggtgcgtggctgacggcgctg
catctgccgtacgcgctctcaccggtggtgctggctgttggcctgctgtttgcgtttctg
catctgcacctggccggacatctcctcggcgtgctgctcgcccagctggtcttcgcctat
gcctacgcggtcatcctgctgagcgcgttgtggacaccacgcgtcgccgcgctggaagac
ctggcgagcaccttgggcgcgcgtcgccttcaggtttggtggcgcgtcctggtgccggtg
gcgcgcccgatgctcgccgtctgcctgttccagacgtttctgatttcctggttcgactac
gcgttggtacggttgatcgggcaaggcgaggtgcagacgctcaccatccgcctgttcgag
tactttacgtccggcgaccttcggctggccgcgacgtgtgccctgatcttgatgacgccg
cccctggtcacgctactggtccatcgcgcggtgcccccgtcgctcctggcaccccaggca
ggctcgtcccatgagtaa
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