Rhodanobacter thiooxydans: LRK53_09080
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Entry
LRK53_09080 CDS
T08065
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
rth
Rhodanobacter thiooxydans
Brite
KEGG Orthology (KO) [BR:
rth00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rth03016
]
LRK53_09080 (truB)
Enzymes [BR:
rth01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
LRK53_09080 (truB)
Transfer RNA biogenesis [BR:
rth03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
LRK53_09080 (truB)
Prokaryotic type
LRK53_09080 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB_C
Motif
Other DBs
NCBI-ProteinID:
UJJ53163
LinkDB
All DBs
Position
2030581..2031507
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AA seq
308 aa
AA seq
DB search
MNRSPRIPFRDLHGIVLLDKPPGLSSNQALQAVRRLLRASKGGHTGALDPLATGLLPLCF
GEATKLAGSLLGARKAYLAECRLGVTTDTADSEGEVVQQRPVPELDDARVEAALARLRGR
IQQVPPMYSALKQGGERLYAKARRGETVELAPREVAVHRLELLAREGDTLQLLVECGSGT
YVRSLAVDLGEDLGCGAHLTALRRIWVEPFREPRMVTLTQLEQAAEQGDEALLAWLLPVS
AGLSDLPVLRLDETQSMAISRGQQIALPGLPEVGHCAAYASDGALLALLEADAEGRARIV
RGFNLPPG
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atgaatcgttcgccgcgcatcccgttccgcgacctgcacggcatcgtgctgctcgacaag
ccgccgggcctgagttccaaccaggcgctgcaggccgtgcgccgactgctgcgtgcgtcc
aagggcggccataccggtgcgctcgatccactggccaccggcctgctgccgctgtgcttc
ggcgaggcgaccaagctggccggcagcctgctgggtgcgcgcaaggcctatctggccgag
tgccggcttggcgtcaccacggataccgccgacagtgagggtgaggtcgttcagcagcgc
ccggtaccggaactcgatgacgccagggtcgaggcggcgctggccaggttgcgcgggcgc
atccagcaggtgccgccgatgtattccgcgctgaagcagggcggcgaacggctgtatgcc
aaggcgcgccgcggcgaaaccgtcgagctggcgccgcgcgaggtggcggtgcaccggctg
gagttgctggcgcgcgaaggcgacacgctgcagttgctggtggagtgcggttcgggtacc
tatgtccgttcgctggcggtggatctgggcgaggacctgggctgcggcgcgcacctgacc
gcgctgcgccggatctgggtcgagccgttccgagagccgcggatggtgaccctgacgcag
ctggagcaggcggcggagcaaggcgacgaggctttgctggcatggctgctgccggtatcg
gccggcctgtccgatctgccggtattgcgactcgatgagacgcagagcatggccatctcg
cgcggccagcagattgcgctgccgggcctgccggaagtcgggcattgcgcggcatacgcc
agcgacggcgcgctgttggcgttgctggaagccgatgccgaagggcgtgcgcgcatcgtg
cgcggcttcaatctgccgccgggctga
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