Rhodanobacter thiooxydans: LRK53_09610
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Entry
LRK53_09610 CDS
T08065
Symbol
gcvP
Name
(GenBank) aminomethyl-transferring glycine dehydrogenase
KO
K00281
glycine cleavage system P protein (glycine dehydrogenase) [EC:
1.4.4.2
]
Organism
rth
Rhodanobacter thiooxydans
Pathway
rth00260
Glycine, serine and threonine metabolism
rth00630
Glyoxylate and dicarboxylate metabolism
rth00670
One carbon pool by folate
rth00785
Lipoic acid metabolism
rth01100
Metabolic pathways
rth01110
Biosynthesis of secondary metabolites
rth01200
Carbon metabolism
Module
rth_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
rth00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
LRK53_09610 (gcvP)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
LRK53_09610 (gcvP)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
LRK53_09610 (gcvP)
00670 One carbon pool by folate
LRK53_09610 (gcvP)
Enzymes [BR:
rth01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.4 With a disulfide as acceptor
1.4.4.2 glycine dehydrogenase (aminomethyl-transferring)
LRK53_09610 (gcvP)
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Gene cluster
GFIT
Motif
Pfam:
GDC-P
GcvP2_C
Aminotran_5
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
UJJ53263
LinkDB
All DBs
Position
complement(2159195..2162083)
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AA seq
962 aa
AA seq
DB search
MSHNPPSLRDLEHHGAFIERHIGPDDAEIAQMLHVIGHDSLESMTDAIVPGAIKSAAPLA
LPPAITEEDALAKIRAIASKNQVFRSFIGQGYYGTHTPNVILRNILENPAWYTAYTPYQA
EISQGRMEALINFQTMCADLTGMEIANASLLDEATAAAEAMTLAKRSCKSKSNVFFVSNG
VHPQTLEVVRTRAEPLGIELVVGADADAAGTEAFGVLLQYPDTFGGIHDYRAIADAVHAR
GGLVAVATDLLALTLLAAPGEWGADIVVGNSQRFGVPFGFGGPHAAFMACRDAYKRSMPG
RLIGVSIDAEGKPAYRLTLQTREQHIRREKATSNICTAQVLLAVMASMYAVYHGPKGLVR
IARRTHRLAAILAAALRQASVAVGKEFFDTLHVTGVDAAALHAKAAAARINLRRIDGGSV
GVSLDESTTRADVIALAALFGGNIADIDALDAATADALPAALARKSAFLTHPVFNTHHSE
HELLRYMRALADKDLAMDRTMIPLGSCTMKLNATAEMIPITWPEFANIHPLAPAAQAQGY
KELIDGLEAMLVECTGYDAVSLQPNSGAQGEYTGLLAIRAYHRSRGEAHRDICLIPESAH
GTNPASAHLCGMTVVVTKCDANGNVDVEDIRAQAGKYSDRLAALMITYPSTHGVFEEDIV
AICDIVHQHGGQVYTDGANMNALVGVAKPGKWGSDVSHLNLHKTFCIPHGGGGPGVGPCA
VKSHLAPFLPKAFGADGVRTHGSGSNAMVSAASFGSASILPISWMYIAMMGAEGLRKATQ
VALLNANYIARRLAPHYPTLYTGRNGLVAHECILDLRPLKDATGIGAEDVAKRLIDFGFH
APTLSFPVSGTLMVEPTESESRYELDRFIDAMIQIRDEIRAIEEGKLEREDNPLKNAPHT
ATMVSGSEWTHAYPRELAVFPLASLKLQKYWPPVARVDNVYGDKHIQCACIPVDAYKEEA
EA
NT seq
2889 nt
NT seq
+upstream
nt +downstream
nt
atgagccacaaccccccttctctgcgcgacctcgaacaccacggcgcgttcatcgagcgc
cacatcggcccggacgacgccgagatcgcgcagatgctgcatgtgatcggccacgattcg
ctggagtcgatgaccgacgcgatcgttcccggcgcgatcaagtccgccgcgccgctggcg
ttgccgccggcgatcaccgaagaggatgcgctggcgaagatccgcgcgatcgccagcaag
aatcaggtgttccgtagcttcatcggccaaggctattacggcacccacacgccgaacgtc
atcctgcgcaacatcctggagaaccccgcctggtacaccgcttacacgccgtaccaggcg
gagatttcgcagggtcgcatggaggcgctgatcaacttccagaccatgtgcgccgacctc
accggcatggagatcgccaacgcctcgctgctggacgaggccaccgccgcggccgaggcg
atgaccctggccaagcgctcgtgcaagtcgaagtcgaacgtgttcttcgtgtcgaacggc
gtgcacccgcagacgctggaagtggtgcgcacgcgtgccgaaccgctgggcatcgagctg
gtggtcggcgcagatgccgacgccgccggcaccgaggcgttcggcgtgctgctgcagtac
ccggacaccttcggtggcatccacgactaccgcgccatcgccgacgccgtgcatgcgcgc
ggcggcctggtcgcggtggccaccgacctgcttgcgctgaccctgctcgccgcgcccggc
gagtggggcgccgacatcgtggtgggcaattcgcagcgcttcggcgtgccgttcggcttc
ggcggcccgcacgccgcgttcatggcctgccgcgacgcgtacaagcgttcgatgccgggg
cgcctgatcggcgtgtcgatcgacgccgaaggcaaacccgcctaccgcctgaccctgcag
acccgtgagcagcacatccgccgcgagaaggccacttccaacatctgcaccgcgcaggtg
ctgctggcggtgatggcctcgatgtacgcggtctaccacggccccaagggcctggtccgc
atcgcccgccgcacgcatcgcctggccgcgatcctcgccgctgcgttgcgccaggccagc
gtcgccgtgggcaaggagttcttcgacaccctgcacgtcaccggcgtggatgccgccgcg
ctgcacgccaaagccgccgcagcacgcatcaacctgcgccgcatcgacggcgggagcgtc
ggcgtcagcctcgacgagagcaccacgcgcgccgacgtgatcgcgctggccgccttgttc
ggcggcaacatcgcggacatcgatgcgctggacgccgccaccgccgatgccctgcctgca
gccctggcgcgcaagagcgcgttcctcacccacccggtgttcaacacccaccacagcgag
cacgagctgctgcgctacatgcgtgcgctggccgacaaggatctggcgatggatcgcacg
atgatcccgctgggctcgtgcaccatgaagctcaacgccaccgccgagatgatcccgatc
acctggccggagttcgccaacatccacccgctggccccggccgcgcaggcgcagggttac
aaggagctgatcgacggtctggaagcgatgctggtcgagtgcaccggctacgacgcggtc
agcctgcagccgaactccggcgcgcagggcgagtacaccgggctgctggcgatccgcgcg
tatcaccgctcgcgcggcgaagcgcatcgcgacatctgcctgattcccgaatccgcccac
ggcaccaacccggcctcggcccacctgtgcggcatgaccgtggtggtgaccaaatgcgac
gccaacggcaacgtcgacgtggaggacatccgcgcgcaggccgggaagtattcggaccgc
ctcgccgcgctgatgatcacctacccgtccacgcacggcgtgttcgaggaagacatcgtg
gcgatctgcgacatcgtccaccagcacggcggccaggtgtataccgacggcgccaacatg
aatgcgctggtcggcgtggccaagcccggcaagtggggctcggacgtatcgcacctcaac
ctgcacaagaccttctgcatcccgcacggcggcggcggcccgggcgtgggcccgtgcgcg
gtgaagtcgcacctggcgccgttcctgcccaaggccttcggtgcggacggcgtgcgcacg
catggcagtggcagcaacgcgatggtgagtgcggccagcttcggcagcgcgtcgatcctg
ccgatctcgtggatgtacatcgcgatgatgggcgcggaaggcctgcgcaaggccacccag
gtcgccctgctcaacgccaactacatcgcccggcggctggcgccgcactaccccaccctg
tacaccggtcgcaacgggctggtggcgcacgagtgcatcctcgacctgcgcccgctcaag
gacgccaccggcatcggcgccgaggacgtggcgaagcggctgatcgacttcggcttccac
gcgcccacgctgagcttcccggtttccggcaccctgatggtggaaccgactgagagcgaa
tcgcgctacgaactggaccgtttcatcgacgcgatgatccagatccgcgacgagatccgc
gcgatcgaggaaggcaagctggagcgcgaggacaacccgctgaaaaacgccccgcacacc
gccaccatggtcagcggcagcgagtggacccatgcctacccgcgcgaactggcggtgttc
ccgctggccagcctgaagctgcagaagtactggccgccggtggcccgcgtcgacaacgtc
tacggcgacaagcacatccagtgcgcctgcattccggtggatgcgtacaaggaagaagcc
gaggcttga
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