Rhodanobacter thiooxydans: LRK53_09860
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Entry
LRK53_09860 CDS
T08065
Symbol
lysS
Name
(GenBank) lysine--tRNA ligase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
rth
Rhodanobacter thiooxydans
Pathway
rth00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
rth00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
LRK53_09860 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
rth01007
]
LRK53_09860 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rth03016
]
LRK53_09860 (lysS)
Enzymes [BR:
rth01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
LRK53_09860 (lysS)
Amino acid related enzymes [BR:
rth01007
]
Aminoacyl-tRNA synthetase
Class II (A)
LRK53_09860 (lysS)
Transfer RNA biogenesis [BR:
rth03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
LRK53_09860 (lysS)
Prokaryotic type
Other AARSs
LRK53_09860 (lysS)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
Motif
Other DBs
NCBI-ProteinID:
UJJ53306
LinkDB
All DBs
Position
2214240..2215760
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AA seq
506 aa
AA seq
DB search
MSEVTDTLPAADENKLIAERREKLKALRGQGIAFPNDFKVDSFAGDLQAEFADKNVHTAE
AVEAAARRVKMAGRIVLKRVQGKVSFVQLQDFSGRIQLFIHQGTVGEVYEAFKGWDMGDI
VGAEGTLMRTKTGELSVRVDQLRLLTKSLRPLPDKHHGMADVEQRYRQRYVDLIVTEEAR
RTFMLRSKIIGYMRQWLEAPARRFMEVETPMMHIIPGGATAKPFVTHHNALDLDLYLRVA
PELYLKRLVVGGFDRVYEINRNFRNEGVSTRHNPEFTMLELYQAYATYHEIMDLTESVIR
DTAQAVLGTTQLEWDGAAIDVGPAFRRWRMEDAVLEHNPEIRREELRDRTAMAAHAKRLG
VQVKDGYGWGKLLLEIFEKTVEHTLIQPTFIIQHPVEVSPLARENDTDKGITDRFELFIN
GKEIANGFSELNDPEDQAARFKAQVEAKDAGDDEAMHFDADYIRALEVGLPPTGGLGIGI
DRLVMLLTGSSSIRDVLLFPYMRPEA
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaagtcaccgataccctgcctgccgccgatgagaataagctgatcgccgagcgc
cgcgaaaaactcaaggcgttgcgcgggcagggcatcgcgttcccgaacgacttcaaggtc
gacagcttcgccggtgacctgcaggccgagttcgctgacaagaacgtgcacacagccgag
gcggtcgaggctgccgcgcgccgggtgaagatggccgggcgcatcgtgctcaagcgcgtg
cagggcaaggtcagcttcgtgcagctgcaggatttcagcggacgcatccagctgttcatc
caccaaggcacggtgggcgaggtctacgaggcgttcaagggctgggacatgggcgacatc
gtgggtgccgaaggcacgctgatgcgcaccaagaccggtgagctctcggtgcgggtcgac
cagttgcgcctgctgaccaagagcctgcgcccgctgccggacaagcaccacggcatggcc
gacgtggagcagcgctaccgccagcgctacgtcgacctgatcgtcaccgaggaagcgcgg
cgcaccttcatgctgcgctcgaagatcatcggctacatgcgccagtggctggaggcgccg
gcgcgccgcttcatggaagtggagacgccgatgatgcacatcattcccggcggcgccacc
gccaagccgttcgtcacccaccacaacgcgctggacctggacctgtacctgcgcgtggcg
ccggagctgtacctgaagcggctggtggtcggcggcttcgaccgcgtctacgagatcaac
cgcaacttccgcaacgagggcgtgtcgacccggcacaaccccgagttcaccatgctggag
ctgtaccaggcttacgccacctaccacgagatcatggacctcaccgagagcgtgatccgt
gacaccgcgcaggccgtgctcggcaccacgcaactggaatgggacggcgccgcgatcgac
gtcggtccggcgttccgccgctggcgcatggaagacgccgtgctggagcacaacccggag
atccggcgcgaggaactgcgcgaccgcacggcgatggccgcgcacgccaagcggctcggc
gtgcaggtcaaggacggctacggttggggcaagctgctgctggagatcttcgagaagacg
gtggaacacaccctgatccagcccaccttcatcatccagcacccggtggaagtgtcgccg
ctggcgcgcgagaacgacaccgacaagggcatcaccgaccgtttcgagctgttcatcaac
ggcaaggagatcgccaatggtttctctgagttgaacgacccggaagaccaggctgcgcgc
ttcaaggcccaggtggaagccaaggacgccggcgacgacgaggcgatgcacttcgacgcc
gactacatccgcgcgctggaagtgggcctgccgcccaccggcggcttgggcatcggcatc
gaccggctggtgatgctgctgaccggctcgtcctcgatccgcgacgtgctgctgttcccg
tacatgcggccggaagcgtga
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