Rhodanobacter thiooxydans: LRK53_11170
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Entry
LRK53_11170 CDS
T08065
Symbol
der
Name
(GenBank) ribosome biogenesis GTPase Der
KO
K03977
GTPase
Organism
rth
Rhodanobacter thiooxydans
Brite
KEGG Orthology (KO) [BR:
rth00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rth03009
]
LRK53_11170 (der)
Ribosome biogenesis [BR:
rth03009
]
Prokaryotic type
GTPases
LRK53_11170 (der)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MMR_HSR1
FeoB_N
KH_dom-like
GTP_EFTU
Dynamin_N
AIG1
RsgA_GTPase
ABC_tran
Arf
AAA_22
cobW
NTPase_1
MeaB
SRPRB
AAA_24
SpoIVA_ATPase
Nuc_deoxyri_tr2
Guanylate_kin
Gtr1_RagA
TadZ_N
Motif
Other DBs
NCBI-ProteinID:
UJJ53545
LinkDB
All DBs
Position
complement(2492914..2494317)
Genome browser
AA seq
467 aa
AA seq
DB search
MLPVVALVGRPNVGKSTLFNVLTRSRDALVADMPGVTRDRHYGICRIGERPFVVVDTGGL
SGTEDAMDVLTAKQVRLAIAEADALVFVVDARDGLLPQDDAILAELRRSGKPIVAVVNKT
DGLDEQAVMAEFFAFGIGATLPLSAAHNRGTDDFLRVLLPLLPADREPAAETEGEDGSIR
VAIVGRPNAGKSTLINRLLGEERLIVSDVAGTTRDPIRVPLERDGKRYTLIDTAGIRRKA
RVEEAVEKFSVIKTLQSIAAAQVVVVMIDARENLADQDLTLIGYAIDEGRALVIAINKWD
DMDPYQRDECRRALDRRLVFVDWAKQVQISALHGSGLRELMRAVVRAHASATRELVSSDL
TKALEKAYESYQPPLVNGHAPKLRFAHPGGTNPPTIVIHGSRTKHIAPAYQRYLENFFRK
RYKLEGTPIRIVFREGENPYAGRKKVLTKEQQHKARRRRSELIKRTR
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgctgcccgtcgtcgcactggttggtcgtccgaatgtcggcaagtcgacccttttcaac
gtgctgacgcgcagccgcgacgccctggtggccgacatgccgggcgtcacccgtgatcgc
cactacggcatctgccgcatcggcgagcggccattcgtggtggtcgataccggcggcctg
tccggcaccgaagacgccatggatgtgctaaccgcgaagcaggtgcgcttggcgatcgcc
gaagcggacgccctggtgttcgtggtcgacgcccgcgacggcctgttgccgcaggacgac
gcgatcctggccgaactgcggcgcagcggcaaaccgatcgtggcagtggtcaacaagacc
gacggcctcgacgaacaggccgtgatggccgagtttttcgccttcggcatcggtgccacc
ttgccgttgtcggcggcgcacaaccgcggcaccgacgattttctgcgcgtgctgttgccg
ctgctgccggccgatcgggagccggccgcggaaaccgagggcgaggacggcagcatccgc
gtggccatcgtcggccgtccgaacgccggcaagtcgaccctgatcaaccgcctgctgggc
gaggagcggctgatcgtctccgacgtcgccggcaccacccgcgatccgatccgggtacca
ctcgaacgtgacggcaagcgctacacgctgatcgataccgccggcatccggcgcaaggcg
cgggtcgaggaggcggtggaaaaattcagcgtcatcaagacgctgcagtcgatcgccgcc
gcccaggtggtggtggtgatgatcgatgcccgcgagaacctcgccgaccaggacctcacc
ctgatcggctacgcgatcgacgagggcagggcgctggtcatcgcaatcaacaagtgggac
gacatggacccgtaccagcgcgacgagtgccgccgcgcgctggatcgccggctggtattc
gtcgactgggccaagcaggtgcagatttccgcgctacacggctcgggcctgcgcgagctg
atgcgcgcggtggtgcgcgcgcatgcatcggcgaccagggagctggtgtcctccgacctc
accaaggcactggaaaaggcttacgagagctatcagccgccgctggtgaacggccacgcg
ccgaagctgcgctttgcgcatcctggcggcaccaacccgccgaccatcgtcatccacggc
agccgcaccaagcacatcgcgccggcctaccagcgctacctcgaaaacttcttccgcaag
cgctacaagctggaaggcacgccgatccggatcgtgttccgcgaaggcgagaatccgtac
gctgggcgcaagaaggtgctgaccaaggaacagcagcacaaggcaagacgccggcgcagc
gagctgatcaagcgcacccgctga
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