Rhodanobacter thiooxydans: LRK53_11260
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Entry
LRK53_11260 CDS
T08065
Name
(GenBank) DNA-3-methyladenine glycosylase
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
rth
Rhodanobacter thiooxydans
Pathway
rth03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rth00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LRK53_11260
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rth03400
]
LRK53_11260
Enzymes [BR:
rth01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
LRK53_11260
DNA repair and recombination proteins [BR:
rth03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
LRK53_11260
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH_5
Motif
Other DBs
NCBI-ProteinID:
UJJ53563
LinkDB
All DBs
Position
2513391..2514023
Genome browser
AA seq
210 aa
AA seq
DB search
MPADAATFLAALDADWASLIAQVGPCSHQAKPARAPYEALVRAVAYQQLHVRAGDAILAR
LLALHPQQAFPSPAQLLEADVDSLRRCGFSARKIETIRGIAAATVDGVVPDLATALALPD
EELVARLCVLKGIGRWTVEMFLIYSLDRPDILPADDFGVREGYRLLKSLDTAPAPKALAA
IGANWSPHRTAAAWYLWCVPRPPKLRQTVG
NT seq
633 nt
NT seq
+upstream
nt +downstream
nt
gtgccggctgacgccgccacgttcctggccgcgctcgacgccgactgggcaagcctgatc
gcgcaggtcggcccgtgcagccaccaggcaaaaccggcgcgcgcgccgtacgaggcgctg
gtacgcgcggtggcctaccagcaactgcacgtgcgggccggcgacgcgatcctggcgcgg
ctgctggcgctgcatccgcagcaggcgtttccgtcaccggcgcaattgctggaggccgat
gtcgacagcctgcgccgctgcggtttttcggcgcgcaagatcgagacgatccgcggcatt
gccgcggccacggtcgacggcgtcgttcccgatctggccacggcattggcgctgccggac
gaggaactggtcgcccggctctgcgtgttgaaaggcatcggccgctggacggtggagatg
ttcctgatctacagcctggaccgcccggacatcctgccagcggacgacttcggcgtacgc
gagggctatcgcctgctgaagtcgctggacacggcgcccgcgccgaaggcgctggcggcg
atcggtgcgaactggagcccgcaccgcaccgctgcggcctggtacctgtggtgcgtgcca
cgcccgccgaagctcaggcagacggtgggctga
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