Rhodanobacter thiooxydans: LRK53_11360
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Entry
LRK53_11360 CDS
T08065
Symbol
carB
Name
(GenBank) carbamoyl-phosphate synthase large subunit
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
rth
Rhodanobacter thiooxydans
Pathway
rth00220
Arginine biosynthesis
rth00240
Pyrimidine metabolism
rth00250
Alanine, aspartate and glutamate metabolism
rth01100
Metabolic pathways
rth01110
Biosynthesis of secondary metabolites
rth01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
rth00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
LRK53_11360 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
LRK53_11360 (carB)
00220 Arginine biosynthesis
LRK53_11360 (carB)
Enzymes [BR:
rth01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
LRK53_11360 (carB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D1
CPSase_L_D3
MGS
ATP-grasp
Dala_Dala_lig_C
ATPgrasp_Ter
ATP-grasp_3
ATP-grasp_4
ATP-grasp_5
ATP-grasp_2
Epimerase
Motif
Other DBs
NCBI-ProteinID:
UJJ53582
LinkDB
All DBs
Position
complement(2530602..2533829)
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AA seq
1075 aa
AA seq
DB search
MPKRTDIKSVLIIGAGPIVIGQACEFDYSGAQACKALKEEGYRVILVNSNPATIMTDPDT
ADAVYIEPINWQTVERIIAKERPDAVLPTMGGQTGLNCALDLADHGVLEKYHVELIGARR
EAIRMAEDRELFKRAMTEIGLESPKSDVARNFEHAVEIQARLGFPVIIRPSFTLGGTGGG
IAYNKEEFEAIVKRGLEMSPTHEVLIDESVLGWKEYEMEVVRDTADNCIIICAIENLDPM
GVHTGDSITVAPAQTLTDKEYQRLRDASIAVLRKIGVDTGGSNVQFGVNPVDGRVVVIEM
NPRVSRSSALASKATGFPIAKVAAKLAVGYTLDELKNDITGGRTPASFEPSIDYVVTKIP
RFAFEKFPAADARLTTQMKSVGEVMAIGRSFHESLQKALRGLEIGKTGLNPTGLDLGTDD
GLAVLKRELREPRPDRVFHLADAFRAGLSLEEVFELSRIDPWFLAAFEDIVQTEAEITRQ
GITALDAPRLRELKRLGFADARIAELIGSDEAAVRHLRQTLGVRPVYKRVDSCAAEFATS
TAYMYSTYEEECEAAPTGRDKIIVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVN
CNPETVSTDYDTSDRLYFEPVTLEDVLEIVHVEKPKGVIVQYGGQTPLKLARALEAAGVP
IIGTSPDSIDLAEDRERFQHMIEKIGLKQPPNRTARNADEALALAREIGYPLVVRPSYVL
GGRAMEVVHDDADLSRYIRDAVKVSNDSPVLLDRFLDHAVEVDVDVIADAEGTVLIGGIM
EHIEEAGVHSGDSSCSLPPYSLSAKIQDEMRRQVSAMAKELKVIGLMNTQFAIQGDTVYI
LEVNPRASRTVPFVSKATGVSLAKIAARVMAGRSLVALGATREVIPSYYSVKEAVFPFLK
FQNVDPILGPEMRSTGEVMGVGRSFGAAFARGHEAAGIKTPVIGKAFLSVRDADKDRLLP
VAREIIARGFSVVATAGTASYLTGHGVACERVNKVLEGRPHIVDLIKNGEIVYIVNTTEG
KQAIADSFSIRREALQHRVTYSTTVAGARALVHSLDFHGDGEVHSLQDLHKELSA
NT seq
3228 nt
NT seq
+upstream
nt +downstream
nt
atgcctaagcgtaccgatatcaagagtgtcctcatcatcggtgccggcccgatcgtgatc
ggccaggcctgcgagttcgactactccggcgcgcaggcgtgcaaggcgttgaaggaagag
ggttaccgggtgatcctggtgaactccaacccggccaccatcatgaccgacccggacacc
gccgacgcggtgtacatcgagccgatcaactggcagacggtggagcgcatcatcgccaag
gagcgccctgacgcggtgctgccgaccatgggcggccagaccgggctgaattgcgcgctg
gacctggccgatcacggtgtgctggagaagtaccacgtcgaactgatcggcgcccggcgc
gaagccattcgcatggccgaggaccgcgagctgttcaagcgggcgatgaccgagatcggg
ctggagagcccgaagtcggacgtggccaggaatttcgagcacgcggtggagatccaggcc
aggctcggcttcccggtgatcatccggcccagcttcacgctgggcggcaccggcggcggc
atcgcctacaacaaggaggagttcgaggccatcgtcaagcgcggcctggagatgtcgccc
acccacgaagtgctgatcgacgaatcggtactgggctggaaggagtacgagatggaagtg
gtccgcgacaccgcggacaactgcatcatcatctgcgccatcgagaatctcgacccgatg
ggcgtgcacaccggcgactcgatcaccgtggcgccggcgcagaccctcaccgacaaggaa
taccagcgcctgcgcgatgcctccatcgcggtgctgcgcaagatcggcgtggacaccggc
ggctccaacgtccagttcggcgtcaaccccgtcgacggtcgcgtggtggtgatcgagatg
aacccgcgcgtgtcgcgttcgtccgcgctggcgtcgaaggctaccggcttcccgatcgcc
aaggtcgccgccaagctggcggtgggctacacgctggacgagctgaagaacgacatcacc
ggcggtcgcacgccggcctcgttcgagccgtcgatcgactacgtggtcaccaagattcca
cgtttcgccttcgagaaattcccggcggccgacgcccgcctgaccacgcagatgaaatcg
gtcggcgaagtgatggcgatcgggcgcagcttccacgaatcgctgcagaaggccttgcgt
gggctggagatcggcaagaccggcctcaacccgaccggcctggacctgggcaccgacgac
gggctggccgtgctcaagcgggagttgcgcgagccgcggcccgatcgcgtgttccacctg
gccgacgcgttccgtgccggactctcgctggaagaagtgttcgagctcagccggatcgat
ccgtggttcctcgctgcgtttgaggacatcgtgcagaccgaggcggaaatcaccaggcag
ggcatcaccgcgctcgatgcgccgcggctgcgcgaactcaagcgactcggtttcgccgac
gcgcgcattgccgagctgatcggcagcgacgaagccgccgtgcgccacctgcggcagacc
ctgggcgtgcgcccggtgtacaagcgggtggactcctgcgcggccgagttcgccaccagc
accgcctacatgtattcgacctacgaggaagaatgcgaggcggcaccgaccggccgcgac
aagatcatcgtgctcggcggcggcccgaaccggatcgggcagggcatcgagttcgactac
tgctgcgtgcacgcgtcgctggcgctgcgcgaggatggttacgaaaccatcatggtcaac
tgcaacccggaaacggtgtcgaccgactacgacacctccgaccggctttacttcgaaccg
gtgacgctggaggacgtgctggaaatcgtccacgtggaaaagcccaagggcgtgatcgtg
cagtacggcgggcagaccccgctgaagctggcgcgcgcgctggaggcagccggcgtgccg
atcatcggcaccagccccgattcgatcgacctggccgaggaccgcgagcgcttccagcac
atgatcgagaagatcggtctgaagcagccgcccaaccgcaccgcgcgcaacgccgacgag
gcgctggcgctggcccgcgagatcggttacccgctggtggtgcgcccgagctacgtgctc
ggcggccgcgcgatggaagtggtgcacgacgacgccgacctgtcgcgctacatccgtgat
gcggtgaaggtgtcgaacgattcgccggtgctgctggaccgcttcctcgaccatgcggtc
gaggtcgacgtggacgtgattgccgatgccgaaggcaccgtgctgatcggcggcatcatg
gagcacatcgaggaggctggcgtgcactcgggcgattcttcgtgctcgctgccgccatat
tcgctgagcgcgaaaatccaggacgaaatgcgccgccaggtcagcgcgatggcgaaagag
ctgaaggtcatcggcctgatgaacacgcagttcgcgatccagggcgacactgtctacatc
ctggaagtgaatccgcgtgcctcgcgcacggtgccgttcgtgtccaaggccaccggcgtg
tcgctggccaagatcgccgcccgcgtgatggcaggccgctcgctggtcgccctgggcgcg
acgcgcgaggtgattccctcgtattactcggtgaaagaggcggtcttcccgttcctgaag
ttccagaatgtcgacccgatcctcggccccgagatgcgctcgaccggcgaggtgatgggc
gtggggcgcagcttcggcgcggccttcgcgcgtggccacgaggcggccgggatcaagaca
ccggtgatcggcaaggcgttcctgtcggtgcgtgacgccgacaaggaccgcctgctgccg
gtcgccagggaaatcattgcgcgcggcttcagcgtggtggccaccgccggtaccgccagc
tacctgaccgggcacggcgtggcctgcgaacgggtcaacaaagtgctcgaaggccgtccg
cacatcgtcgacctgatcaagaacggcgagatcgtctacatcgtcaacaccaccgagggc
aagcaggcgatcgccgattcgttctcgatccggcgcgaggcgctgcagcatcgcgtcacc
tattccaccacggtggccggtgcccgcgcgctggtgcattcgctggatttccacggcgac
ggtgaggtacacagcctgcaggatctgcacaaggagctaagcgcatga
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