KEGG   Rhodanobacter thiooxydans: LRK53_11975
Entry
LRK53_11975       CDS       T08065                                 
Symbol
rnc
Name
(GenBank) ribonuclease III
  KO
K03685  ribonuclease III [EC:3.1.26.3]
Organism
rth  Rhodanobacter thiooxydans
Pathway
rth03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:rth00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    LRK53_11975 (rnc)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rth03019]
    LRK53_11975 (rnc)
   03009 Ribosome biogenesis [BR:rth03009]
    LRK53_11975 (rnc)
   03036 Chromosome and associated proteins [BR:rth03036]
    LRK53_11975 (rnc)
Enzymes [BR:rth01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.3  ribonuclease III
     LRK53_11975 (rnc)
Messenger RNA biogenesis [BR:rth03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     LRK53_11975 (rnc)
Ribosome biogenesis [BR:rth03009]
 Eukaryotic type
  90S particles
   RNase
    LRK53_11975 (rnc)
 Prokaryotic type
  rRNA processing factors
   LRK53_11975 (rnc)
Chromosome and associated proteins [BR:rth03036]
 Eukaryotic type
  Gene silencing
   microRNA pathway
    Microprocessor complex
     LRK53_11975 (rnc)
SSDB
Motif
Pfam: Ribonucleas_3_3 Ribonuclease_3 dsrm RM44_endonuclase DND1_DSRM
Other DBs
NCBI-ProteinID: UJJ53697
LinkDB
Position
complement(2670146..2670805)
AA seq 219 aa
MEPNYRFRDPTLAQLALTHRSVGRPNNERLEFLGDALLGAIVAEMLYEAHPKASEGELSR
LRAQLVNGQALAVVARELALGDGLKLGPGELKSGGFRRDSILADAFEAMVAAVYQDGGFD
ACREFVRGLFAERIVALRRSSKDAKTRLQEWLQAKGLPLPQYELVASHGEDHAKTFDVSC
SIGEPLAFIAEAHGGSRRAAEQDAAETVLNRLLEQQRDA
NT seq 660 nt   +upstreamnt  +downstreamnt
ttggaaccgaactaccgttttcgcgacccgacgctggcgcagctggcgctgacccaccgc
agcgtcggcaggccgaacaacgagcggctggagttcctcggcgatgcgctgctcggcgcg
atcgtcgccgagatgctgtacgaagcccaccccaaggccagcgaaggcgagctgtcgcgg
ttgcgggcgcaactggtcaacggccaggcgctggccgtggtggcacgcgaactggcgttg
ggcgacgggctgaaactcggccccggcgaattgaagagcggcggcttccggcgcgattcg
atcctcgccgacgcgttcgaggcgatggtcgccgcggtctaccaggacggcggcttcgac
gcctgccgcgagttcgtgcgcgggctgttcgccgaacgcatcgtcgccctgcgccgctcc
tccaaggacgccaagacgcggctgcaggaatggctgcaggccaagggcctgccgttaccg
cagtacgaactggtcgccagccatggcgaggaccacgccaagaccttcgacgtcagctgc
agcatcggcgaaccgctggcgttcatcgccgaagcgcatggcggcagccgccgtgccgcg
gagcaggacgcagccgagaccgtgttgaaccggctgctggaacagcagcgcgacgcctga

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