Rhodanobacter thiooxydans: LRK53_11995
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Entry
LRK53_11995 CDS
T08065
Name
(GenBank) Do family serine endopeptidase
KO
K04771
serine protease Do [EC:
3.4.21.107
]
Organism
rth
Rhodanobacter thiooxydans
Pathway
rth01503
Cationic antimicrobial peptide (CAMP) resistance
rth02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
rth00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
LRK53_11995
09160 Human Diseases
09175 Drug resistance: antimicrobial
01503 Cationic antimicrobial peptide (CAMP) resistance
LRK53_11995
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rth01002
]
LRK53_11995
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
rth03110
]
LRK53_11995
Enzymes [BR:
rth01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.21 Serine endopeptidases
3.4.21.107 peptidase Do
LRK53_11995
Peptidases and inhibitors [BR:
rth01002
]
Serine peptidases
Family S1: chymotrypsin family
LRK53_11995
Chaperones and folding catalysts [BR:
rth03110
]
Other chaperones and cochaperones
DegP / HtrA
LRK53_11995
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Trypsin_2
PDZ_2
Trypsin
PDZ_6
PDZ
PDZ_Tricorn
Peptidase_S46
PDZ_1
Peptidase_S29
Motif
Other DBs
NCBI-ProteinID:
UJJ53701
LinkDB
All DBs
Position
complement(2674315..2675787)
Genome browser
AA seq
490 aa
AA seq
DB search
MSHSILRSLACFALLGIASAGTVQAQAPAAAALPDFTGIVQKNAPAVVHVEARYNGERQG
NSRSMHGQTMPGQGMPDDPQAEILRRFFGMPMMPSPQEQKHISLGSGFIISGDGYILTNN
HVVDHADKVTVRLQDRRTLTAKVIGTDPTYDIALLKVDAGGSLPAVTLGDSRSLKPGQWV
LAIGSPFGFDYTVTQGIVSAVGRNLGQRDQPYTSFIQTDVPINRGNSGGPLFDLQGRVVG
INSQIYSNTGTYSGVAFSIPIDVAMNAVQQLKSKGYVSRGMLGVTVQPVDDDMVKAFGLD
NGVGAAVVDVTAGSGAAKAGIQSGDVILAYDGRTLQQAPDLPPLVGMTKPGSKVPVEILR
NGKKQTLQVTVGEASRDRNAMNGQGTAPSLARSGSAVLGLTVQSIDDDTRTQLGLKPGQG
VVIGDITGSVAAQAGLQTGDVILMVNQQKVGSVAEFEAATKGVKAGSTVLLLVRRGEQSS
FIGLTVPDGE
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atgagccattccatcttgcgcagcctggcgtgctttgcgctgctgggcatcgccagtgcc
ggtacggtgcaggcgcaggcgccggccgcggcggcgctgccggacttcaccggtatcgtg
cagaagaacgcgccggccgtggtgcacgtcgaggcccgctacaacggcgagcggcagggc
aacagccgcagcatgcacgggcagacgatgcccggccagggcatgccggacgacccgcag
gcggagatcctgcggcgcttctttggcatgccgatgatgccgtcgccgcaggagcagaag
cacatctcgctgggctcgggcttcatcatttccggcgatggctacatcctcaccaacaac
cacgtggtcgaccatgccgacaaggtgaccgtgcgcctgcaggaccggcgcacgctgact
gccaaggtgatcggcaccgacccgacctatgacatcgccctgctcaaggtggatgccggc
ggcagcctgccagcggtgaccctcggcgactcgcgcagcctcaagccggggcagtgggtg
ctggcgatcggctcgccgttcggcttcgactacacggtgacccagggcatcgtcagcgcg
gtgggccgcaacctgggccagcgcgatcagccgtacacctcgttcatccagaccgacgtg
ccgatcaaccgcggcaattccggcggcccgctgttcgacctgcagggccgggtggtgggc
atcaactcgcagatctattccaacaccggcacctactccggggtggcgttctcgatcccg
atcgacgtggcgatgaacgcggtgcagcagctcaagagcaagggctacgtgtcgcgcggc
atgctgggagtgacggtgcagccggtcgacgatgacatggtcaaggcgttcggcctggac
aacggcgtaggcgcggcggtagtcgacgtcaccgcgggcagcggtgcggccaaggccggc
atccagtcgggcgacgtgatcctggcctacgacgggcggacgctgcagcaggccccggac
ctgccgccgctggtgggcatgaccaagccgggcagcaaggtgccggtggaaatcctgcgc
aacggcaaaaagcagacgctccaggtcaccgtcggcgaggcctcgcgcgaccgcaacgcg
atgaatggccagggcacggccccgtcgctggcgcgcagcggctcggccgtgctgggtctg
accgtacagtcgatcgacgacgacacccgcacccagctcggcctgaagccggggcagggc
gtggtgatcggcgacatcaccgggtcggtggcggcgcaggcgggattgcagacgggcgac
gtcatcctgatggtcaaccagcagaaggtcggcagcgtggccgagttcgaggcggccacc
aagggcgtgaaggccggcagcacggtactgttgctggtgcgccgcggcgaacagagcagt
ttcatcggcctgaccgtaccggatggcgaatga
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