Rhodanobacter thiooxydans: LRK53_12090
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Entry
LRK53_12090 CDS
T08065
Symbol
dnaQ
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
rth
Rhodanobacter thiooxydans
Pathway
rth03030
DNA replication
rth03430
Mismatch repair
rth03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rth00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LRK53_12090 (dnaQ)
03430 Mismatch repair
LRK53_12090 (dnaQ)
03440 Homologous recombination
LRK53_12090 (dnaQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rth03032
]
LRK53_12090 (dnaQ)
03400 DNA repair and recombination proteins [BR:
rth03400
]
LRK53_12090 (dnaQ)
Enzymes [BR:
rth01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LRK53_12090 (dnaQ)
DNA replication proteins [BR:
rth03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LRK53_12090 (dnaQ)
DNA repair and recombination proteins [BR:
rth03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LRK53_12090 (dnaQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
UJJ53714
LinkDB
All DBs
Position
complement(2693618..2694328)
Genome browser
AA seq
236 aa
AA seq
DB search
MRQIVLDTETTGLEVRQGHRLVEIACVELVERRLTGRHYQTYLNPDRAIDQGARLVTGIE
DEFLLDKPRFAEVATEFLAFIDGAELIIHNASFDIGFLDAELARLGEHAGRIGDRCSVLD
TLAMARERYPGQRNSLDALCKRLGVDNSRRDLHGGLIDAQLLADVYLAMTSGQVAFDLGF
EGASEQLDVMVAAPVVLHVRPRVLRASAEELSAHEQRLDALDKSGADGQSVWRRLG
NT seq
711 nt
NT seq
+upstream
nt +downstream
nt
atgaggcagatcgttctcgacaccgaaaccaccggcctggaagtgcgccagggccaccgg
ctggtggaaatcgcctgcgtcgaactggtcgagcgccgacttaccggtcggcactaccag
acctacctgaacccggatcgggcgatcgaccagggcgcccgactggtcaccggcatcgag
gacgagttcctgctcgacaagccgcgcttcgctgaggtggcgacggagttcctcgccttc
atcgacggcgccgagctgatcatccacaacgccagcttcgacatcggctttctcgatgcc
gaattggcccggctgggtgaacacgccggccggatcggcgaccgctgcagcgtgctggac
accctggcgatggcgcgcgagcgctaccccggccaacgcaacagcctcgatgcgttgtgc
aaacggctcggcgtggacaactcgcggcgcgacctgcacggcggcctgatcgacgcgcag
ctgctggccgacgtgtacctggcgatgacctcgggacaggtggccttcgaccttggcttc
gagggggcgagcgaacagctcgacgtgatggtggctgcgccggtggtgctgcatgtgcgg
ccgcgggtattgcgtgcctcggcggaggagttgtcggcacatgaacaacgcctggatgca
ttggacaagagcggtgcggatgggcagagcgtgtggcggcggttggggtga
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