Rhodanobacter thiooxydans: LRK53_12110
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Entry
LRK53_12110 CDS
T08065
Name
(GenBank) transglycosylase SLT domain-containing protein
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
rth
Rhodanobacter thiooxydans
Brite
KEGG Orthology (KO) [BR:
rth00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rth01011
]
LRK53_12110
Enzymes [BR:
rth01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
LRK53_12110
Peptidoglycan biosynthesis and degradation proteins [BR:
rth01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
LRK53_12110
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SLT
LysM
LysM_RLK
HTH_23
Motif
Other DBs
NCBI-ProteinID:
UJJ56566
LinkDB
All DBs
Position
2696699..2697739
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AA seq
346 aa
AA seq
DB search
MPGCDADPAVLAWARHYTRHPRQFESQLQAVLPRLVYVQQVADRYDVAGEFVLLPWVESR
FQPVAARKRRPAGMWQIMPMTAGAMGLRVDGHYDGRLDVPAAANAVMKLLEQYHEQFQDW
RVADYAYNAGEFKIRQMIQTHGMPAEQPAIPHLPVRKVTREHLTRLLGMACVVREPERFN
VSLPTLPDEQQLVRTELSRSMPITRAADHAGMSVEALRHLNPAFRSNTIDASTAPYLILP
ARHARQFRDALLEQASSAGGDLLASLGGGDIAARPVPDPSTARKTHTVRHGDSLWQIARA
YSISVSQLQRWNRLGSHALKPGQTLTVSAPDQERSEQLPSPPQKRG
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atgccgggttgcgacgccgaccccgctgtgctggcgtgggccagacactacacgcgccat
ccgcggcagttcgaaagccagctgcaggcggtgctgccgcgcctggtgtacgtgcaacaa
gtggcggaccgctacgacgtcgccggcgagttcgtgctgctgccctgggtggaaagccgc
ttccagccggtagctgcgcgcaagcgccgcccggccggcatgtggcagatcatgccgatg
accgccggcgcgatggggctgcgtgtcgatggccactacgacggccggcttgacgtgccc
gccgccgccaacgccgtgatgaaactgcttgagcagtaccacgaacagttccaggactgg
cgcgtggccgattacgcgtacaacgccggcgaattcaagatacgccagatgatccagacg
cacggcatgcccgcggagcagccggcgatcccgcacttgcccgtgcgcaaggtgacgcgc
gaacacctgaccaggctgctcggcatggcttgcgtagtgcgcgaaccggaacgcttcaac
gtcagcctgcccacgctgccggacgagcagcagctggtgcggaccgagctctcccgctcg
atgccgatcacgcgggcggccgatcacgccggcatgtcggtggaggcgttgagacacctc
aacccggcgttccgcagcaacacgatcgatgccagcacggccccctacctgatcctgccg
gcccgccacgcccgccagttccgcgatgccctgctcgaacaagccagcagcgccggcggc
gatttgctggccagccttggcggcggcgacatcgcggccaggccggtgcctgatccgagc
acggcccggaagacccataccgtgaggcacggcgacagcctgtggcagatcgcccgcgcc
tactcgatcagcgtcagccagctgcagcgctggaaccgcctgggcagccatgcgctgaag
cctggtcagaccctgacggtaagcgcgccggaccaggaacggtccgaacaactgccgtca
cccccgcaaaagcggggatga
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