Rhodanobacter thiooxydans: LRK53_12240
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Entry
LRK53_12240 CDS
T08065
Symbol
rlmE
Name
(GenBank) 23S rRNA (uridine(2552)-2'-O)-methyltransferase RlmE
KO
K02427
23S rRNA (uridine2552-2'-O)-methyltransferase [EC:
2.1.1.166
]
Organism
rth
Rhodanobacter thiooxydans
Brite
KEGG Orthology (KO) [BR:
rth00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rth03009
]
LRK53_12240 (rlmE)
Enzymes [BR:
rth01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.166 23S rRNA (uridine2552-2'-O)-methyltransferase
LRK53_12240 (rlmE)
Ribosome biogenesis [BR:
rth03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
LRK53_12240 (rlmE)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FtsJ
Methyltransf_31
Methyltransf_23
Methyltransf_25
Response_reg
Motif
Other DBs
NCBI-ProteinID:
UJJ53733
LinkDB
All DBs
Position
complement(2719331..2719984)
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AA seq
217 aa
AA seq
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MARSKSSAVWLREHFNDEYVKKAQAEGLRSRAVYKLEELIERDRLLKPGINVVDLGAAPG
SWSQLVRNRLGDSGKVFALDILPMQSIAGVDFLQGDFREETVLHELESRLEGLKVDLVLC
DMAPNMSGVALADQIRAMDLAELALDFSRQWLKPGGSFLIKLFQGVGFDDYLRSLRADFT
RVTMRKPKASRARSREVYALATGFKPAAAHPARTVHE
NT seq
654 nt
NT seq
+upstream
nt +downstream
nt
atggcccgcagcaagagcagcgcagtctggctgcgtgaacacttcaacgacgaatacgtg
aagaaggcccaggccgagggtttgcgttcgcgtgcggtgtacaagctggaggaattgatc
gagcgcgaccgcctgctgaagcccggcatcaacgtggtcgacctcggtgcggcgcctggc
agctggtcgcaactggtgcgcaaccggctgggcgacagcggcaaggtgttcgcgctggac
atcctgccgatgcagagcatcgccggggtggatttcctgcagggcgatttccgcgaggaa
accgtgctgcacgagctggaatcccgcctggaggggctcaaggtggatcttgtgctgtgc
gatatggcccccaatatgagtggggtggcgctggccgaccagatccgggccatggatctg
gctgaactggcgctggatttcagccggcagtggctcaagccgggcggctcgttcctgatc
aaattgttccagggagtcggcttcgacgattacttgcgcagcttgcgtgcggactttacc
cgcgtaaccatgcgtaaacccaaggcctcgcgtgcgcgttcgcgtgaggtatacgcgctg
gcgaccggcttcaagccagccgccgcgcatccggcgagaaccgtgcatgaatga
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