Rhodanobacter thiooxydans: LRK53_12620
Help
Entry
LRK53_12620 CDS
T08065
Symbol
sdhA
Name
(GenBank) succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
rth
Rhodanobacter thiooxydans
Pathway
rth00020
Citrate cycle (TCA cycle)
rth00190
Oxidative phosphorylation
rth00650
Butanoate metabolism
rth00720
Other carbon fixation pathways
rth01100
Metabolic pathways
rth01110
Biosynthesis of secondary metabolites
rth01120
Microbial metabolism in diverse environments
rth01200
Carbon metabolism
Module
rth_M00009
Citrate cycle (TCA cycle, Krebs cycle)
rth_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
rth_M00149
Succinate dehydrogenase, prokaryotes
rth_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
rth00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
LRK53_12620 (sdhA)
00650 Butanoate metabolism
LRK53_12620 (sdhA)
09102 Energy metabolism
00190 Oxidative phosphorylation
LRK53_12620 (sdhA)
00720 Other carbon fixation pathways
LRK53_12620 (sdhA)
Enzymes [BR:
rth01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
LRK53_12620 (sdhA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
Pyr_redox_2
Thi4
DAO
GIDA
FAD_binding_3
Motif
Other DBs
NCBI-ProteinID:
UJJ53806
LinkDB
All DBs
Position
complement(2794132..2795919)
Genome browser
AA seq
595 aa
AA seq
DB search
MESYKIQQHKYDVVVVGAGGAGLRATFGLAEKGLKAACVTKVFPTRSHTVAAQGGIAAAL
GNMGEDDWRFHFYDTVKGGDWLGDQDAIEYMCKNAPQSVIELEHYGVPFSRTEDGHIYQR
PFGGMTTHYGKGTAQRTCAAADRTGHAILHTLYQQALAHDATFFVEYFATDLIFDEEGVC
RGVLALDMNEGTLHVFRGQAVVLATGGYGRAYFSATSAHTCTGDGGGMVLRAGLALQDME
FVQFHPTGIYGAGCLITEGVRGEGGYLTNSNGERFMERYAPSAKDLASRDVVSRAITIEI
REGRGVGEHKDHAFLNLMHLGAEVIHERLPGIAESARIFAGVDVTREPIPILPTVHYNMG
GIPTNYHGEVVQKKGDDIDAVVPGLFAIGEAACVSVHGGNRLGSNSLLDLVVFGRAAAHR
CAELIQPGAAHKDLPASALDKALARFDGLRHANGELPTAQIRLDMQRTMQADAAVFRTGE
TLKEGCTKIDKVHDSFKQVKVSDRSMVWNSDLIETLELANLLDQAVATMHSAEQRPESRG
AHAREDFPERNDAEWMKHTLVKVDERGKTSFDYRPVHMFTLTDEVEVVPPKKRVY
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
gtggaaagctacaagatccagcagcacaagtacgacgtggtggtggtcggcgccggcggc
gccggcctgcgcgccaccttcggcctcgccgagaagggcctcaaggcggcctgcgtcacc
aaggtgtttcccacccgctcgcacaccgtggcggcgcagggcggcattgccgccgcgctc
ggcaacatgggcgaggacgactggcgcttccacttctacgacaccgtgaagggtggcgac
tggctgggcgaccaggacgcgatcgaatacatgtgcaagaacgcgccgcagtcggtgatc
gagctggagcactacggcgtgccgttctcgcgcaccgaggacggccatatctaccagcgc
ccgttcggcggcatgaccacgcactacggcaagggcaccgcgcagcgcacctgcgccgcc
gccgaccgcaccggccacgccatcctgcacacgctgtaccagcaggcgctggcgcatgac
gccacgttcttcgtggagtacttcgccaccgacctgatcttcgacgaggaaggcgtctgc
cgcggcgtgctggcgctggacatgaacgagggcacgctgcacgtgttccgcggccaggcc
gtggtgctggccaccggcggctacggccgcgcctatttcagcgccacctcggcgcacacc
tgcaccggcgacggcggcggcatggtgctgcgcgccggcctggcgttgcaggacatggag
ttcgtgcagttccatcccaccggcatctacggcgccggctgcctgatcaccgagggcgtg
cgcggcgaaggcggctacctcaccaattccaacggcgagcgcttcatggagcgctatgcg
cccagcgccaaggacctggcatcgcgcgacgtggtcagccgggccatcaccatcgagatc
cgcgaaggccgcggcgtgggcgagcacaaggaccacgccttcctcaacctgatgcatctg
ggcgccgaggtgatccacgagcggctgccgggcatcgccgagtcggcgcgcatcttcgcc
ggcgtggacgtgacccgggagccgatcccgatcctgcccaccgtgcactacaacatgggt
ggtattcccaccaactaccacggcgaagtggtgcagaagaagggcgacgacatcgacgcc
gtggtgccgggcctgttcgccatcggcgaggcagcctgcgtgtcggtgcacggcggcaac
cgcctcggctccaactcgctgctcgacttggtggtgttcggccgcgcggcggcgcatcgc
tgcgccgaactgatccagcccggcgccgcgcacaaggacctgccggccagcgcgctggac
aaggcgctggcgcgcttcgatggcttgcgccacgccaacggcgagctgcccaccgcgcag
atccgcctcgacatgcagcgcaccatgcaggcggacgccgccgtgttccgcaccggcgag
acactgaaggaaggctgcacgaagatcgacaaggtgcacgactcgttcaagcaggtgaag
gtcagcgaccgctcgatggtatggaactccgacctgatcgagacgctggagctggccaac
ctgctcgaccaggcggtggccaccatgcactcggccgagcagcgcccggaaagccgcggc
gcccacgcgcgcgaggacttccccgaacgcaacgacgccgagtggatgaagcacaccctg
gtgaaggtggacgaacgcggcaagaccagcttcgactaccgcccggtgcacatgttcacc
ctgaccgacgaggtcgaggtggtgccgccgaagaagcgcgtttactga
DBGET
integrated database retrieval system
