KEGG   Rhodanobacter thiooxydans: LRK53_13650
Entry
LRK53_13650       CDS       T08065                                 
Name
(GenBank) AMP-binding protein
  KO
K01897  long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
Organism
rth  Rhodanobacter thiooxydans
Pathway
rth00061  Fatty acid biosynthesis
rth00071  Fatty acid degradation
rth01100  Metabolic pathways
rth01212  Fatty acid metabolism
rth02024  Quorum sensing
rth04146  Peroxisome
Module
rth_M00086  beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:rth00001]
 09100 Metabolism
  09103 Lipid metabolism
   00061 Fatty acid biosynthesis
    LRK53_13650
   00071 Fatty acid degradation
    LRK53_13650
 09140 Cellular Processes
  09141 Transport and catabolism
   04146 Peroxisome
    LRK53_13650
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    LRK53_13650
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01004 Lipid biosynthesis proteins [BR:rth01004]
    LRK53_13650
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:rth04147]
    LRK53_13650
Enzymes [BR:rth01000]
 6. Ligases
  6.2  Forming carbon-sulfur bonds
   6.2.1  Acid-thiol ligases
    6.2.1.3  long-chain-fatty-acid---CoA ligase
     LRK53_13650
Lipid biosynthesis proteins [BR:rth01004]
 Acyl-CoA ligase
  Long/very long chain acyl-CoA ligase
   LRK53_13650
Exosome [BR:rth04147]
 Exosomal proteins
  Exosomal proteins of breast milk
   LRK53_13650
  Exosomal proteins of breast cancer cells
   LRK53_13650
SSDB
Motif
Pfam: AMP-binding AMP-binding_C_3
Other DBs
NCBI-ProteinID: UJJ53994
LinkDB
Position
complement(3010039..3011727)
AA seq 562 aa
MVEANAPTLLHQFQVWERERPDAIYLTQPFPDGSVVDYSWAEVGLQARCMAAYLRSLRLP
AGSSIAILGKNSAHWIIADLAIMMAGHVSVPMYPTLGAETARYILDHSEARLLFVGKLDG
SSDNWPQIEKMLPPDLPLLGLPMTPRADIPQWDDLVARHAPLQPVHDAMPEELCSIIYTS
GSTGQPKGVMHNYRSMMAPGPAFTEMIVITREDRLLSYLPLAHAAERAIVESSSLYVGLH
MYFCNNMDSFVHDIRRARPTIFFSVPRLWTKFQQGVNAKLSPSKQRRLFALPLVSRLVKR
KILRGLGLDQVRVAITGSAPLAADIIAWYRRLGLTLLEGYGMSENLAVSHSCRPGDVRIG
YVGTCLRGVQARIAPTGEVLVRSPGQMMGYYKRPELTAQVMLPDGFFCTGDRGEIDADGR
LRITGRVKDLFKTARGKYVAPALIENELGNHPKLESACVTGPGQPQPFALLRLAPEVQQV
VDADPGLRNTLDAELAALLEQVNANVEHHEQLGYAVVVKDSWTTENGLLTPTLKIKRQAI
EDRYLDNAGAWLAMDQKVIWEK
NT seq 1689 nt   +upstreamnt  +downstreamnt
atggttgaggccaacgcaccgacgttgctgcatcaattccaggtgtgggaacgcgaacgg
ccggacgccatctatctgacccagcctttccccgatggcagcgtggtcgattacagctgg
gccgaggttggcctgcaggcgcgatgcatggcggcgtatctgcgctcgctgcggcttcca
gcgggcagcagcattgcgatcctgggcaagaacagcgcgcactggattatcgccgacctc
gccatcatgatggccggccacgtcagcgtgccgatgtatcccacgctcggtgccgagacg
gcgcgctacatccttgaccacagcgaagcgcggctgctgttcgtcggcaaactcgacggc
agcagcgacaactggccacagattgaaaaaatgcttccgccggacctgccgttgctcggc
ctgccgatgactccgcgcgccgacatcccgcagtgggacgaccttgtcgcccggcatgca
ccgctgcagccagtgcatgacgcaatgcccgaggaactgtgctccatcatttacacctca
ggcagtaccgggcaaccgaaaggggtgatgcacaactatcgcagcatgatggcgccgggg
cccgctttcaccgagatgatcgtgatcacccgcgaggaccggctgctgtcgtatctgccg
ctggcgcatgccgccgagcgcgccattgtggagtccagctcgctgtacgtcggactgcac
atgtacttctgcaacaacatggacagcttcgtgcacgacatccggcgcgcgcgaccgacg
atcttcttttcggtgccgcggctctggaccaagttccagcagggcgtcaatgccaaactg
tcgccgtcgaaacagcggcggttgtttgcgttgccgctggtctcgcggctggtcaagcga
aagattctccgtggtctgggcctcgatcaggtgcgcgttgccatcaccggctcggcacca
ctggccgccgacatcatcgcctggtaccgccggctcggcctgacgctactcgagggttac
ggcatgagcgagaacctcgctgtttcacacagctgccgcccgggagatgtgcggatcggc
tacgtcggcacctgcctgcgcggcgtgcaggcgcgcatcgcgcccaccggcgaagtgctg
gtcagaagtccgggccagatgatgggttactacaagcggccggaactgacggcacaggtc
atgttgcccgacggctttttctgcacgggcgatcgcggtgagatcgatgcggatggacgc
ttgcgcattaccggtcgggtcaaggatctgttcaagacggctcgcggcaaatatgtcgcg
ccggcgctgatcgagaacgagctcggcaaccatccaaaactggaaagcgcctgcgttacc
ggccccgggcagccgcagccgttcgcgctgctgcgcctcgcgccggaagtgcagcaggtc
gtggatgccgatcccggtctgcgcaatacgctggacgccgagctcgctgcgctgctggag
caagtcaacgcgaacgtggaacaccacgaacagctcggttacgcggtggtcgtcaaggac
agctggaccaccgagaacggcctgcttacgccgacgctgaagatcaagcgccaggcgatc
gaggatcgctatctggacaacgccggcgcatggctcgcgatggaccaaaaagtcatctgg
gaaaagtaa

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