Rhodanobacter thiooxydans: LRK53_13665
Help
Entry
LRK53_13665 CDS
T08065
Name
(GenBank) 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein
KO
K01782
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
]
Organism
rth
Rhodanobacter thiooxydans
Pathway
rth00071
Fatty acid degradation
rth00280
Valine, leucine and isoleucine degradation
rth00310
Lysine degradation
rth00362
Benzoate degradation
rth00380
Tryptophan metabolism
rth00410
beta-Alanine metabolism
rth00640
Propanoate metabolism
rth00650
Butanoate metabolism
rth00907
Pinene, camphor and geraniol degradation
rth00930
Caprolactam degradation
rth01100
Metabolic pathways
rth01110
Biosynthesis of secondary metabolites
rth01120
Microbial metabolism in diverse environments
rth01200
Carbon metabolism
rth01212
Fatty acid metabolism
Module
rth_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
rth00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
LRK53_13665
00650 Butanoate metabolism
LRK53_13665
09103 Lipid metabolism
00071 Fatty acid degradation
LRK53_13665
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
LRK53_13665
00310 Lysine degradation
LRK53_13665
00380 Tryptophan metabolism
LRK53_13665
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
LRK53_13665
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
LRK53_13665
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
LRK53_13665
00930 Caprolactam degradation
LRK53_13665
Enzymes [BR:
rth01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
LRK53_13665
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
LRK53_13665
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
LRK53_13665
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
ECH_2
3HCDH
NAD_binding_2
DAO
F420_oxidored
AlaDh_PNT_C
2-Hacid_dh_C
Pyr_redox_2
NAD_binding_8
ApbA
UDPG_MGDP_dh_N
NAD_Gly3P_dh_N
Motif
Other DBs
NCBI-ProteinID:
UJJ53997
LinkDB
All DBs
Position
complement(3013342..3015492)
Genome browser
AA seq
716 aa
AA seq
DB search
MTANNPVTLEIDADGIGLVTFDQPGRAMNVLNPELVAPFAAIVERLEKEEAIKGLVLTSG
KSTFIVGADIDQLTAISTAEEAFSLCEDLKALLRRIEKCGKPVVAALNGTALGGGLEVAL
ACHARFALDEAALKLGLPEVKLGLLPGGGGTQRLPRMIGIQKSFELLTQGTELRAAEARG
LGLVNDLATSREELLQKSRAWCVANPRAAQPWDKQGFRIPGGDSKHPGVVQLLAIAPSIA
NAKAHGNYPAIGHIMSCLFEGCLLDFDAACQVESRYFAACVVSQESRNMIGTLWHQLNAI
KKGQSRPAGVAPCRVRKIGILGAGMMGAGIAYVSAKAGIEVILLDTTIENAEKGKSYSQG
LLNKAILRGRSTPDKRDALLAKITPTTRYEDLQGCDLVIEAVFEDRAIKAACTQKAEAVI
AADAVFASNTSTLPITGLAKASVRPKNFIGLHFFSPVDKMPLVEIIVGEQTSNETLARGF
DYVLQIGKTPIVVNDSRGFYTSRVFATYVMEGLAMLGEGVHPRSIEAAGIKAGMPMPPLA
LQDEVSLGLSLHVADQTRKDLAAEGKPLPEHPGEPVLRMIGGTHQRLGRKTGKGLYDYDG
RDKHLWPELTRLYPTAAEQPTQQELIDRLMFVQANEAARCFEENVVRSVADANIGSIFGW
GFAPFHGGALQFISAMGAAGFVARSRELAERYGARFAPADIVVKQAAVGGRFEGAA
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atgaccgctaacaaccctgtcaccctcgagatcgacgccgacggcatcggcctggtcacc
tttgaccagcccggccgcgcgatgaacgtgctcaaccccgagctggtcgcaccgttcgcc
gccatcgtcgagcggctggagaaagaggaggccatcaagggcctcgtgctcacttccggc
aagtcgaccttcatcgtcggtgccgacatcgatcagctcaccgcgatcagcacagccgag
gaagccttcagcctctgcgaagacttgaaggcgctgctgcgccggatcgaaaagtgcggc
aagccggtagtcgctgcgctcaacggcaccgccttgggcggcggccttgaagtggcgctg
gcctgccatgcgcgtttcgcgctggacgaggccgcgctcaagctcggcctgcccgaggtc
aagctgggcctgctgcccggcggcgggggcacccagcggttgccgcgcatgatcggcatc
cagaagagttttgaactgcttactcagggcaccgaactgcgcgccgccgaggccaggggc
ctgggtctggtcaacgaccttgccaccagccgcgaggaactgctgcagaaatcgcgtgcg
tggtgcgtggccaatccgcgtgccgcgcagccgtgggacaagcagggcttccgcattccg
ggcggcgacagcaagcacccgggcgtggtgcagttgctggcgattgcaccgtccatagcc
aacgccaaggcgcacggcaactaccccgcgatcggccacatcatgtcgtgcctgttcgaa
ggttgcctgctggatttcgatgcggcctgccaggtggagtcgcgctactttgctgcctgc
gtggtatcgcaggaatcgaggaatatgatcggcacgctgtggcaccagctcaacgcgatc
aagaagggccagtcgcgcccggccggcgtggcgccgtgcagggtgcgtaaaatcggcatc
ctcggtgcgggcatgatgggggcgggcatcgcctacgtttcggccaaggccggcatcgag
gtgatcctgctcgacaccacgatcgagaacgccgagaagggcaagtcgtattcgcaaggt
ctgctcaacaaggccattttgcgcggccgcagcacgccggacaagcgcgatgcgttgttg
gcaaagatcacgccgaccacccgttacgaagacctgcaaggctgtgatctggtgatcgag
gcggtgttcgaggatcgcgccatcaaggcggcctgcacgcagaaagccgaggcggtaatc
gctgccgatgcggtgttcgcatccaatacctccaccctgccgatcaccggcctggccaag
gccagtgtgcgcccgaaaaacttcatcggcctgcatttcttctcgccggtggacaagatg
ccgctggtcgagatcatcgtcggcgagcaaacctcgaacgaaacactggcacgcggtttc
gactacgtgctgcagatcggcaagaccccgatcgtggtcaacgacagccgcggcttctac
acctcgcgcgtgtttgccacctacgtgatggaaggcttggcgatgctgggcgaaggcgtg
catccgcgctcgatcgaggcggccggcatcaaggccggcatgccgatgccgccgctggcg
ctgcaggatgaagtctcgctgggcctgtcgttgcatgtcgccgaccagacccgcaaggat
ctggccgccgaaggcaaaccgttgcccgagcatccgggcgagccggtgctgcgcatgatc
ggtggcacgcaccagcgcctgggcaggaaaaccggcaagggcctgtacgactacgacggt
cgggacaagcacctgtggccggagctgaccaggctgtatccgaccgcagccgaacagccc
acgcagcaggaactgatcgaccgcctgatgtttgtgcaggccaacgaagccgcgcgctgc
ttcgaggagaacgtggtgcgttcggtggccgacgccaacatcggctcgatcttcggctgg
ggcttcgcgccgttccacggtggtgcactgcagttcatcagcgcgatgggagcggcagga
ttcgtggcacgttcgcgtgaactggccgaacgctacggcgcgcgcttcgcacccgccgac
atcgtggtgaagcaggccgccgttggcgggcgcttcgagggcgcggcgtga
DBGET
integrated database retrieval system
