Rhodanobacter thiooxydans: LRK53_16130
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Entry
LRK53_16130 CDS
T08065
Name
(GenBank) DNA polymerase III subunit chi
KO
K02339
DNA polymerase III subunit chi [EC:
2.7.7.7
]
Organism
rth
Rhodanobacter thiooxydans
Pathway
rth03030
DNA replication
rth03430
Mismatch repair
rth03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rth00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LRK53_16130
03430 Mismatch repair
LRK53_16130
03440 Homologous recombination
LRK53_16130
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rth03032
]
LRK53_16130
03400 DNA repair and recombination proteins [BR:
rth03400
]
LRK53_16130
Enzymes [BR:
rth01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LRK53_16130
DNA replication proteins [BR:
rth03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LRK53_16130
DNA repair and recombination proteins [BR:
rth03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LRK53_16130
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_chi
YehQ_C
Motif
Other DBs
NCBI-ProteinID:
UJJ54463
LinkDB
All DBs
Position
3546337..3546756
Genome browser
AA seq
139 aa
AA seq
DB search
MRADFYLIDKPRFREQPLLLVCELAKKAFAGEQPTLILARDFAQAEALDELLWAFDDDAM
IPHQLAGDDDDEQTAVLIAPPGVDSADRPLLINLRESCPAGHYQRVLEVVAADPAERAGS
RTRWREYQRLGFELHKYDM
NT seq
420 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgccgacttctacctgatcgacaagccgcgcttccgcgagcagccgctgctgctg
gtctgcgagctggcgaagaaggcattcgccggcgagcagccgacgctgatcctggcccgc
gactttgcccaggccgaggcgctggacgagctgctgtgggcgttcgacgacgacgcgatg
atcccgcaccagctggccggtgatgacgacgacgagcagaccgcggtgctgatcgcgccg
ccaggcgtggacagcgccgaccggccgctgctgatcaacctgcgcgagagctgccccgcc
ggccactaccagcgcgtgctggaagtggtggccgccgacccggccgaacgcgcgggctcg
cgtacgcgctggcgcgagtaccagcggctgggtttcgagctgcacaagtacgacatgtga
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