Rhodanobacter thiooxydans: LRK53_16300
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Entry
LRK53_16300 CDS
T08065
Symbol
rsmI
Name
(GenBank) 16S rRNA (cytidine(1402)-2'-O)-methyltransferase
KO
K07056
16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:
2.1.1.198
]
Organism
rth
Rhodanobacter thiooxydans
Brite
KEGG Orthology (KO) [BR:
rth00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rth03009
]
LRK53_16300 (rsmI)
Enzymes [BR:
rth01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.198 16S rRNA (cytidine1402-2'-O)-methyltransferase
LRK53_16300 (rsmI)
Ribosome biogenesis [BR:
rth03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
LRK53_16300 (rsmI)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TP_methylase
RsmI_C
HAD
DUF2138
Motif
Other DBs
NCBI-ProteinID:
UJJ54494
LinkDB
All DBs
Position
complement(3588710..3589540)
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AA seq
276 aa
AA seq
DB search
MNRLSELGSLWVVATPIGHRDDLSARAIDTLRQVAVIAAEDTRHSRPLLVHHNIDTPLIA
LHEHNEREAVESIVRRMQAGEAVALISDAGTPLISDPGFRLVRAARAAGIRCIPVPGACA
AIAALSVAGLPSDRFVFEGFLPPKAASRRSRLQELAGDARTLIFYESSHRVAESLADMRD
VFGAGREAVLARELTKLFETVIGKPLAELAARVANDPDQQRGECVILVAGRGEEADAKLA
EGQRVFAILREELPPAKAAKLAAAISGAPRKTLYES
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgaacaggctctcggaattaggctccctgtgggtggtcgccacgccgatcggccatcgc
gacgatctttccgcgcgcgccatcgacacgctgcgccaggtggcggtgatcgccgccgag
gacacccgccacagccggccgttgctggtgcatcacaacatcgacacgccgctgatcgcg
ctgcacgagcacaacgagcgcgaggcggtggagtcgatcgtgcgccgcatgcaggctggc
gaggcggtggcgctgatctccgatgcgggtacgccgctgatcagcgatccgggtttccgg
ctggtgcgcgccgcgcgcgccgccggcatccgttgcattccggtgccgggcgcctgcgcg
gcgatcgccgcgctgtcggtggccggcctgcccagcgaccgtttcgtgttcgagggtttc
ctgccgccgaaggcggcgtcgcggcgcagccggctgcaggaactggccggcgacgcgcgc
acgctcatcttctatgagtcgtcgcaccgcgtcgccgaaagcctggccgacatgcgcgac
gtgttcggcgccgggcgcgaggcggtgctggcgcgcgagctgaccaagctgttcgagacg
gtgatcggcaagccgctggcggagctggccgcacgggtggcgaacgatcccgaccagcag
cgcggcgaatgcgtgatcctggtcgccggccgcggcgaggaagccgacgcgaagctggcc
gagggccagcgcgtgttcgccatcctgcgcgaggagctgcccccggccaaggccgccaaa
ctcgcggccgcgatcagcggcgcgccgcgcaagaccttgtatgaatcgtga
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