Rhodanobacter thiooxydans: LRK53_16420
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Entry
LRK53_16420 CDS
T08065
Name
(GenBank) hydroxymethylglutaryl-CoA lyase
KO
K01640
hydroxymethylglutaryl-CoA lyase [EC:
4.1.3.4
]
Organism
rth
Rhodanobacter thiooxydans
Pathway
rth00280
Valine, leucine and isoleucine degradation
rth00650
Butanoate metabolism
rth00907
Pinene, camphor and geraniol degradation
rth01100
Metabolic pathways
rth01120
Microbial metabolism in diverse environments
rth04146
Peroxisome
Module
rth_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
rth00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
LRK53_16420
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
LRK53_16420
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
LRK53_16420
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
LRK53_16420
Enzymes [BR:
rth01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.4 hydroxymethylglutaryl-CoA lyase
LRK53_16420
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Paralog
GFIT
Motif
Pfam:
HMGL-like
ETF
Motif
Other DBs
NCBI-ProteinID:
UJJ54516
LinkDB
All DBs
Position
complement(3616661..3617584)
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AA seq
307 aa
AA seq
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MSTVDVVINEVGPRDGLQNQARVLDVAERITMIQALVDAGLRSVEAGSFVSPKAVPQMAN
TVAVFAQLPRPDLVRYSALIPNARGYELASVAGARTLSVVLSATETMNRRNINLSLEQTT
VICAELMRRAREDDIQGWAYLAVAYECPFEGETPVARVERLAAKMIEAGADKLIVADTIG
AANPAQVHLLISRLVASYGAERIACHFHDTRGMALANVLAALDEGIRAFDSSIGGLGGCP
FSPGASGNVATEDVVLMIESMGLRTGIDPLALVAVVDHCSELLGSPLGGHAYNWLKRQAT
QKAGRLA
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atgagcaccgtcgacgtggtcatcaatgaggttggcccccgggatgggttgcagaaccag
gcacgcgtgctcgacgtcgccgagcgcatcaccatgattcaggcattggtcgacgccggc
ttgcgcagcgtcgaagcaggcagtttcgtctcgcccaaggccgttccgcaaatggccaac
acggtggcggtgttcgcacagttgccacgcccggacctggtccgttactcggcgctgatc
ccgaatgcgcgtggctatgaactggcgagcgtggcgggcgcgcgtacgttgtcggtggtc
ctgtctgctaccgaaaccatgaaccggcgcaacatcaacctgagtctcgaacagacgacg
gtgatctgcgcagagttgatgcgccgcgccagagaggatgacatccaaggttgggcctat
ctggccgtcgcgtacgaatgtccgtttgagggtgagactcccgtcgcccgggtagagcgt
cttgccgcaaagatgatcgaagccggcgctgacaagctgatcgtcgccgacaccataggt
gcggccaacccggcccaggtccatctgctgatttcccgcctggtggcgagttacggcgcg
gagcggattgcctgccactttcacgacacacgaggcatggcactggcgaacgtacttgcc
gcgcttgacgagggcatacgcgctttcgacagctcgatcggtggtctgggcggatgcccc
ttctctccgggagcgagcggcaacgtggccaccgaagatgttgtgttgatgatcgaatcg
atgggcctgcgcacaggcatcgatccgctggccctggtcgcggtggttgaccattgcagc
gaattgctgggttccccgctgggcggacacgcatacaactggctgaaacgccaggcgacc
cagaaagccgggaggctggcgtga
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