Rhodanobacter thiooxydans: LRK53_16710
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Entry
LRK53_16710 CDS
T08065
Name
(GenBank) penicillin-binding protein 1A
KO
K05366
penicillin-binding protein 1A [EC:
2.4.99.28
3.4.16.4
]
Organism
rth
Rhodanobacter thiooxydans
Pathway
rth00550
Peptidoglycan biosynthesis
rth01100
Metabolic pathways
rth01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
rth00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
LRK53_16710
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
LRK53_16710
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
rth01003
]
LRK53_16710
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rth01011
]
LRK53_16710
Enzymes [BR:
rth01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
LRK53_16710
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
LRK53_16710
Glycosyltransferases [BR:
rth01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
LRK53_16710
Peptidoglycan biosynthesis and degradation proteins [BR:
rth01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
LRK53_16710
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transgly
PCB_OB
Transpeptidase
Motif
Other DBs
NCBI-ProteinID:
UJJ54567
LinkDB
All DBs
Position
3676230..3678758
Genome browser
AA seq
842 aa
AA seq
DB search
MQIFKRLLRWALALAFSGLLLAVVAVGVAYWLIAPRLPSVAELKNYPMQVPLRVLSADGK
LIASFGETRRIPVDIGKVPDRLKHAVLSAEDADFYHHPGVDWHGIARAGWHVLVTGGDKG
PGGSTITQQVARNFFLSPEKLYSRKLTEIFIALRIEHELSKDQILELYLNKMFLGHRSYG
VAAAAEYYYGKTLDQLTVAECALIASTFQLPSAVNPINSPKRAIARRNWVLGEMLRHDYI
TKAVYEQAIAEPNRAYPHEQPIEVDAPYLAEMVRRQVLDRFGNDALTEGYVVRTTLQSGR
QQAAVEALRDGLIAYDRRHGWRGPEAHQELPAGAGEAELDSLLSAYTSVSGMQPGIVTAS
DAKQATVYLSNRESVILDLATVSWARPHINDDRVGAAPSRVDGVLKRGDIIRLARDDKGE
WQLAQIPAAQAALASVAPEDGSIQALVGGFNFVRSKFNRAVMAARQPGSSFKPYLYSAAF
ERGFTPASIINDAPLALPDPSRPNGIWTPSNDDDKFAGPMRLREALVQSKNLVSVRLLDA
VGVRYMREYATRFGFSQDAMPANLSMALGTASVSPMGMARGYAVFANGGYLVTPYFIHEI
DDRNGQPVYVANPARACRNCQERLLDTRPPGPPPAGMNPAPANSLASASSTAPAGSGSVD
GVGDAVLPADAHGEGAHPPVLAPGVIEARNDYLVTSLMKDVILRGTGSAARALERDDLAG
KTGSTNDHRDAWFVGFDGELSTAVWVGFDDYSSLGRGEFGAKAALPIWMSYMGSVLKGQP
SSTLPMPPGISTVWINRYSGLPTATSDPDGINEIFRVEDVDRLRSQAAQQKEQDQQHAYD
IF
NT seq
2529 nt
NT seq
+upstream
nt +downstream
nt
atgcaaattttcaaacgcttgctgcgctgggctctggccctggccttttccggtttgctc
cttgcagtggtcgcggtgggtgtagcgtactggctgatcgcgccgaggctgccctcggtg
gccgaattgaagaactacccgatgcaggtgccgctgcgcgtgttgagcgccgacggcaag
ctgatcgccagtttcggcgagacccggcgcatcccggtggacatcgggaaggtgccggac
cggctcaagcacgccgtgctgtcggccgaggatgcggacttctaccaccatcccggcgtg
gactggcacggcatcgcgcgcgccggctggcacgtgctggtgaccggcggcgacaagggc
cccggcggctcgacgatcacccagcaggtcgcccgcaacttcttcctgagcccggagaag
ctctactcgcgcaagctcaccgagatcttcatcgcgctgcgcatcgagcacgagctcagc
aaggaccagatcctcgagctgtacctcaacaagatgttcctcggccatcgctcgtacggc
gtggccgcggccgccgagtactactacggcaagacgctggaccagctgaccgtggccgaa
tgcgcgctgatcgcctcgaccttccagctgccctcggcggtcaacccgatcaacagcccg
aagcgcgcgatcgcccgacgcaactgggtgctgggcgaaatgctgcgccatgactacatc
accaaggccgtgtacgagcaggcgatcgccgaaccgaaccgcgcctacccgcacgagcag
ccgatcgaggtggacgccccgtacctggccgagatggtgcgccggcaggtgctcgaccgc
ttcggcaacgacgcgctgaccgaaggctacgtagtcaggaccacgctgcagagcggccgc
cagcaggccgccgtggaagcgctgcgcgacgggctgatcgcctacgaccgccggcacggc
tggcgcgggccggaagcccaccaggagctgcctgccggcgccggcgaggcggagctggac
agcctgctgtccgcctacaccagcgtctccggcatgcagccgggcatcgtcacggccagc
gacgcaaagcaggccacggtctacctgtccaaccgcgagagcgtgatcctcgacctcgcc
actgtcagctgggcgcgcccacacatcaacgacgaccgcgtcggcgcggcgccgagccgg
gtcgacggcgtactcaagcgcggcgacatcattcggctggcgcgcgacgacaagggcgag
tggcagctggcgcagattccggctgcgcaggccgcgctggcctcggtcgcgccggaggac
ggctcgatccaggcgctggtgggcggcttcaacttcgtgcgcagcaagttcaaccgggcg
gtgatggcggcgcgccagcccggttccagcttcaagccctacctgtactcggcggcgttc
gagcgcggtttcacccccgcctcgatcatcaacgacgcgccgctcgcgctgcccgaccct
tcgcgtccgaacgggatctggacgccctccaacgacgacgacaagttcgccgggccgatg
cgcctgcgcgaagcgctggtgcagtcgaagaacctggtctcggtgcgcctgctggacgcc
gtcggcgtgcgctacatgcgcgaatacgccacccgcttcggcttctcgcaggacgccatg
ccggccaacctgtcgatggcgctgggcaccgcctcggtgtcaccaatgggcatggcccgc
ggctacgcggtgttcgccaacggcggctacctggtcacgccgtacttcatccacgagatc
gacgaccgcaacggccagccggtgtacgtggccaaccccgcgcgcgcctgccgcaactgc
caggagcgcctgcttgacacacggccacccggcccgccaccggccgggatgaaccccgcg
cccgccaacagcctggccagcgcctcgtccaccgcgcccgccgggtccggcagcgtcgac
ggcgtcggagacgcggtgctgccggccgacgcgcatggcgaaggcgcgcatccgccggta
ctcgcgccgggcgtgatcgaggcacgcaacgactacctggtcacctcactgatgaaggac
gtgatcctgcgcggcaccggctcggccgcacgcgcgttggagcgcgacgacctggccggc
aagaccggctccaccaacgaccaccgcgacgcctggttcgtcggcttcgacggcgagctg
tcgaccgccgtgtgggtgggcttcgacgactacagctcgctcggccgcggcgagttcggc
gccaaggccgcgctgccgatctggatgtcctacatgggcagcgtgctcaaggggcagccg
tcgagcacgttgccgatgccaccgggaatcagtacggtatggatcaaccgctacagcggg
ctgcccaccgccaccagcgaccccgacggcatcaacgagatattcagagtggaagacgtc
gaccgcctgcgcagccaggccgcccagcagaaggagcaggaccagcagcacgcctacgac
atcttctga
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