KEGG   Rhodanobacter thiooxydans: LRK53_17040
Entry
LRK53_17040       CDS       T08065                                 
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
  KO
K01586  diaminopimelate decarboxylase [EC:4.1.1.20]
Organism
rth  Rhodanobacter thiooxydans
Pathway
rth00300  Lysine biosynthesis
rth00470  D-Amino acid metabolism
rth01100  Metabolic pathways
rth01110  Biosynthesis of secondary metabolites
rth01120  Microbial metabolism in diverse environments
rth01230  Biosynthesis of amino acids
Module
rth_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:rth00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    LRK53_17040 (lysA)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    LRK53_17040 (lysA)
Enzymes [BR:rth01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.1  Carboxy-lyases
    4.1.1.20  diaminopimelate decarboxylase
     LRK53_17040 (lysA)
SSDB
Motif
Pfam: Orn_Arg_deC_N Orn_DAP_Arg_deC Ala_racemase_N DUF6781
Other DBs
NCBI-ProteinID: UJJ54628
LinkDB
Position
3743623..3744927
AA seq 434 aa
MPTQTTNRPAAQETARETDGAPGMFDGVDLRQLAERIATPFHAYSASAIRQRIDELQAAL
AGLDAAICFAVKANPNLAILQLMANAGVGADIVSVGELRRALNAGIPAERIVFSGVGKSA
DEIAGALNVGIMHFNVESLDELHTLQRLAKAQEVTARAAMRINPDVDAQTHARISTGKSE
NKFGVSIDEARRWFAGRKALTHVQLDGLHVHIGSQILSLDPFRLALQRVAAFWRELEQAG
HPVNSIDVGGGLGVCYRAGVDRPLAATDYVGVIRAALAGFRGRLLLEPGRWLVAEAGVLL
TRVLRIKQGAERRFLVLDAAMNDLQRPSLYDAWHDIVPVADEPRPPATYDIVGPVCETGD
TFARARELPECSAGDLLLIRATGAYGASMASSYNSRTLAAEVLLDQGRYAVVRRRQHFEE
MIAGEQPARNWETA
NT seq 1305 nt   +upstreamnt  +downstreamnt
atgcccacgcagacgacgaaccgcccggcagcgcaggaaaccgcccgggaaacggacggt
gcccccggcatgttcgacggcgtcgacctgcggcaactggccgaacgcatcgccaccccc
tttcatgcctactccgccagcgcgatccgccagcgcatcgacgaactccaggccgcgctg
gccggcctcgacgccgccatctgcttcgcggtcaaggccaacccgaacctcgccatcctg
caattgatggcgaacgccggcgtcggcgccgacatcgtctcggtcggcgaactgcgccgc
gcgctcaacgccggcatcccggccgagcgcatcgtgttttccggcgtcggcaagagcgcc
gacgagatcgccggcgcgttgaacgtcggcatcatgcacttcaacgtcgaatcgctggac
gagctgcacaccctgcagcgcctcgcgaaagcgcaagaggtgaccgcgcgtgccgcaatg
cgcatcaaccccgacgtggacgcgcagacccacgcgaggatctccaccggcaaatcggaa
aacaagttcggcgtcagcatcgacgaggcacgccgctggttcgccggccgcaaggcgctg
acccacgtgcagctcgacggcctgcacgtgcacattggctcgcagatcctcagcctcgac
ccgttccgcctcgcgctgcagcgggtcgccgcgttctggcgcgaactcgaacaggccggc
catccggtcaacagcatcgacgtgggcggcggtctcggcgtgtgctaccgcgccggcgtg
gaccggccactcgctgccaccgattacgtcggcgtgatccgcgccgcgctggccggcttc
cgcggccgcctgctgctggagccgggccgctggctggtggccgaggctggcgtgctgctg
acccgcgtgctgcgcatcaagcaaggcgccgagcggcgcttcctggtgctggacgcggcg
atgaacgatctgcagcggcccagcctgtacgacgcctggcacgacatcgtgccggtcgcg
gacgaaccgcgcccgccggctacctacgacatcgtcggcccggtctgcgaaaccggcgat
actttcgctcgggcgcgcgagctgcccgagtgctcggcgggcgacctcttgctgatcagg
gccaccggcgcgtacggtgcgtcgatggcgtccagctacaactcgcggacgctggcggcc
gaggtcctgctcgaccagggccgctatgccgtggtgcgccgtcgccagcacttcgaggaa
atgatcgccggcgagcagccggcgcggaactgggaaaccgcatga

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