KEGG   Remersonia thermophila: 98121878
Entry
98121878          CDS       T10833                                 
Symbol
VTJ83DRAFT_1110
Name
(RefSeq) hypothetical protein
  KO
K10885  ATP-dependent DNA helicase 2 subunit 2
Organism
rthe  Remersonia thermophila
Pathway
rthe03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:rthe00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    98121878 (VTJ83DRAFT_1110)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rthe03400]
    98121878 (VTJ83DRAFT_1110)
DNA repair and recombination proteins [BR:rthe03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    DNA-PK complex
     98121878 (VTJ83DRAFT_1110)
SSDB
Motif
Pfam: Ku_PK_bind Ku Ku_N VWA Radical_SAM Ku_C
Other DBs
NCBI-GeneID: 98121878
NCBI-ProteinID: XP_070870463
JGI: Remth1_1110
LinkDB
Position
1:complement(join(3986159..3986179,3986247..3986716,3986782..3986993,3987045..3987442,3987498..3988019,3988072..3988132,3988186..3988679))
AA seq 725 aa
MADKEATVYIVDLGESMADCHNGRTESDLVFAMRYVWDKLSATVAANRKTWTVGVVGLNT
DDTANPQDEQGLEGYEHISVLHELGPITRSSLKSLRSTIQPSRTHGGDAISAVVVATSMI
EVFTKKLKYKRRIVLVTNGESPIDDESSDEVAARLNECNIELVVIGVDFDDPEYGFKEED
KSRAKRNNEETLRRLVEQCKDGVFGTMAQAVEELAVPRIKPVRPFKAYDGPLTLGDPDRY
QSALAFHVERYFKTKRAAPPSASTVVSSSMDRPGPSQTQTLDGDLDTEDVEFSGVKQMRS
YKVNDPDAPGGKRDVKFEDLAKGYQYGRTVVPFSESDFNVTKFDTKKSFSILGFVPWSSY
REFLNMGETGLIVAQKHNEEAELGLSALINTLHELESYAVARYVQKDGVQPQILLLKPNP
ATEDSFECLYDVPLPFAEDVRTYQFPPLDKVLTVTGNVLKEHRLLPSKDLKEAMSNFVDA
MDISDMDVDEHGNPVEYAPIDELYNPTIHRLNQAIRARAVDEEAPIDAPADILLRFSNPP
QKLLDKAKAEIAALIDAAEVKKVPEKAQGWRGRKETVKPLSGLDIDALLSEKPRKTISSE
NAIPEFKQMLSTAADDATVESAAKQMGEIVRKLIRDSFADVLYPRAAENLRVMREELIAL
ELPGLYNKYVAGLKKSILSGELDGDRREMWFRHVVAGRLGLITKDESEVSEVTAEEAKAF
ATSIN
NT seq 2178 nt   +upstreamnt  +downstreamnt
atggccgacaaggaggccaccgtctacattgtggacctcggcgagtccatggccgactgc
cacaacggccgcaccgagtcggacctcgtctttgccatgcgctacgtctgggacaagctg
tctgccacggtcgccgccaatcgcaaaacctggaccgtcggcgtcgtggggctcaatacc
gatgacacggccaatccccaggatgagcaggggctcgagggctatgagcacatctcggtg
ctccatgaactcggccctattacccggtcttcgttgaagtctctccggtccaccatccaa
ccgtcgcgcacccacggcggagacgccatctcggccgtcgtcgtcgccacgtccatgatc
gaggtcttcacgaaaaagctaaagtacaaacggcgcatcgtcctcgtcaccaacggcgag
tcccccattgacgacgagtcgtccgatgaggtggccgcccgcctcaacgaatgcaacatt
gagcttgtcgtcatcggcgtcgatttcgacgatcccgagtacggcttcaaggaggaagac
aagtcaagggccaagcggaacaacgaggaaacgctgcggaggctcgtcgagcagtgcaag
gatggcgtgtttggcaccatggcgcaggccgtcgaggagctggcggttccccgtatcaag
cccgtgcggccgttcaaggcgtacgacggtcccctcacgctcggagaccccgacaggtac
cagagcgcgcttgcctttcacgtcgagcggtatttcaaaaccaagcgtgccgctccgccc
tcggcgagcaccgtggtgagcagcagcatggacaggccggggccgtcccaaacacaaacc
ctcgatggggacttggacacggaagacgtcgagttctccggggtgaagcagatgcgctct
tacaaagtcaacgacccagacgcgcccggcgggaaacgggacgtcaagtttgaggacctc
gccaaggggtaccagtatggccggaccgtggtgcccttcagcgagtcggacttcaacgtc
acaaagtttgacacaaagaagtcgttttccatcctcggcttcgtcccatggagcagctac
cgcgagttcctcaacatgggcgagacgggtctcatcgtggcccaaaaacacaacgaggag
gccgagctgggtctctcggctctcatcaacaccctccacgagctcgagtcgtacgccgtg
gcgagatacgtgcagaaggacggcgtgcagccgcagatcctgctgctcaagccgaacccc
gccaccgaggacagcttcgagtgcctctacgacgtgcctttgccgtttgccgaggacgtc
cgcacgtatcagttccctcctctcgacaaggttcttaccgtcacgggcaacgttctcaag
gagcatcgcctgcttccgtccaaagaccttaaggaagccatgagcaatttcgttgacgcc
atggatatttccgacatggacgtcgacgagcatgggaatccggtcgaatacgcgcccata
gacgagctctacaacccgacgatccaccgcctcaaccaggccatccgggcccgcgccgtg
gacgaggaagcacccatcgatgcgccggccgatatcctgcttcgcttctcaaaccccccg
cagaagctgctcgacaaggccaaggcggaaatcgcagccctcatcgacgcagccgaggtc
aagaaggtccccgagaaggcgcagggatggcgcggccgcaaagagacggtcaagcccctg
tccggcctcgacatcgacgcgctgctcagcgagaagccgcgcaagaccatttcatcggaa
aacgcgatccccgagttcaagcagatgctgtccacggcggcggacgacgcgacggtggag
agcgcggcgaagcagatgggcgagatcgtgcgaaagctgatccgcgacagctttgcggat
gtgctgtatccccgagcggccgagaacctgcgcgtcatgcgagaggagctcatcgccctg
gagctgccgggcctgtacaataagtacgtggctgggctgaaaaagagcattctctcgggc
gagctcgatggggatcgccgggagatgtggttccgccatgtggtggccggcaggttgggg
cttataaccaaggacgagtccgaggtgtcggaggtgacggccgaggaagcaaaggcgttt
gcaacctcgatcaactga

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