Remersonia thermophila: 98121882
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Entry
98121882 CDS
T10833
Symbol
VTJ83DRAFT_1114
Name
(RefSeq) hypothetical protein
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
rthe Remersonia thermophila
Pathway
rthe03440
Homologous recombination
rthe03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
rthe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
98121882 (VTJ83DRAFT_1114)
03460 Fanconi anemia pathway
98121882 (VTJ83DRAFT_1114)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rthe03032
]
98121882 (VTJ83DRAFT_1114)
03400 DNA repair and recombination proteins [BR:
rthe03400
]
98121882 (VTJ83DRAFT_1114)
Enzymes [BR:
rthe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
98121882 (VTJ83DRAFT_1114)
DNA replication proteins [BR:
rthe03032
]
Eukaryotic type
DNA Topoisomerases
98121882 (VTJ83DRAFT_1114)
DNA repair and recombination proteins [BR:
rthe03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
98121882 (VTJ83DRAFT_1114)
FA (Fanconi anemia) pathway
98121882 (VTJ83DRAFT_1114)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim
Motif
Other DBs
NCBI-GeneID:
98121882
NCBI-ProteinID:
XP_070870467
JGI:
Remth1_1114
LinkDB
All DBs
Position
1:join(3995874..3996101,3996158..3996355,3996431..3996609,3996672..3996841,3996945..3997927,3997972..3998280,3998359..3998369,3998432..3998485,3998676..3998724)
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AA seq
726 aa
AA seq
DB search
MNIRRASVAALRCWLRHHDLVNPAHLGSRLRLGFYASRATAATATTTNMTRILCVAEKPS
IAKAVATHLSGGQYQTSNTRNTYIKNYSFTFDFGPPWGHCDVTMTAVKGHLTAVEFPGDY
KQWEFPPPDSLFDAPVLTVVPDDNKSIAKNIEDQAKRATALVIWTDCDREGEHIGSEIRD
AARKGNRQIQVKRARFSNVERAHILSAARRLVSLDEKQVDAVAARIELDLRIGYAFTRFL
TLSLRPMGGPLQGLTLSYGSCQFPTLGFVVDRYFRVKNFVPEPFWSIKVMHERDGIKVNF
NWARHRLFDRMMAVVLYERCLVARTATVTKVSEKPTRKFKPLPLTTVELQKMATRFLRMT
GQQAMTIAEKLYNKGFISYPRTETDRFDRGMDLRALVRKQTQDSRWGPFAQNLVDGAFQQ
PRQGRHDDKAHPPIHPITYAAPQALDDGERRLYELVVRRFLACCSDDAKGVASDVEMLYG
DEVFSAHGVMVLERNYLDVYPYENWSGTAVLPRFTVGERFEPTEALLSEGKTTAPSYLTE
ADLIALMDANGIGTDATMAEHIEKIQERQYVRTVPRGGGGAGDADDGSWPRTGWSCGAGR
PRRGSGGGGGGSGVREFIPTSLGVALIEGFDRMRFETSLGKPFLRKEMELKMKAICEGRT
TKQLVLRESIEGYRRVFEQSRAELNVLKAACRQELKHVGLVMSAVVFGRPLLEQNATLRI
ETPRRI
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
atgaacatacggcgagcctccgtggcggctctgcgctgctggttgagacatcacgacctg
gtcaaccccgcccacctgggttctcgcctccggctcggcttctacgcttcacgcgcgacg
gccgcaacggcgaccaccaccaacatgacgcgcatcctctgcgtggccgagaagccctcc
atagcaaaggccgtggccacccacctgtcgggtggccaataccaaaccagcaacactcga
aatacctacatcaaaaactactcgttcacctttgactttggcccgccatggggccactgc
gacgtgaccatgaccgccgtcaagggccatctcacggccgtcgagttcccgggcgactac
aagcaatgggagttccccccgccggacagcttgtttgacgcccccgtgctcacggtggtc
ccggacgacaacaagtccatcgccaagaacatcgaggaccaggccaagcgagcgacggcc
ctcgtcatctggaccgattgcgaccgcgaaggagagcacatcggcagcgagatccgggat
gccgcgcgcaagggcaaccgccagatccaggtcaagcgggcccgcttcagcaacgtcgag
cgagcgcacatcctgtccgccgcccggcggctggtttcgctcgatgagaagcaggtcgac
gccgtggcggcccgcatcgagctcgacctacgcatcggctacgccttcacccggttcctg
accctcagcctgcggccgatgggtgggccattgcagggcctcaccctgagctacggctct
tgtcagttccccaccctcggcttcgtcgtcgaccggtacttccgcgtcaagaacttcgtg
cccgagcccttctggtccatcaaggtcatgcacgagcgcgacggcatcaaggtcaacttc
aactgggctcggcaccgcctctttgaccgcatgatggccgtcgtgctgtacgagcgatgc
ctcgtcgcgcgcaccgccaccgtgaccaaggtgtcggagaagcccacgcgcaagttcaaa
cccctcccgctcaccaccgtcgagctccaaaagatggccacccggttcctgcgcatgacg
ggccagcaagccatgacgatcgccgagaagctctacaacaagggcttcatcagctacccg
cgcaccgaaacggaccgcttcgaccgcggcatggacctgcgggccctcgtgcgcaagcaa
acccaagactcgcgctgggggccttttgctcagaacctcgtcgacggcgccttccagcag
ccgcgccagggccggcacgacgacaaggcccacccgcccatccaccccatcacgtacgcg
gccccgcaggcgctcgacgacggcgagcgccgcctctacgagctggtcgtccgccgcttc
ctggcctgctgctccgacgacgccaagggcgtggcgagcgacgtcgagatgctctacggc
gacgaggtcttctcggcgcacggcgtcatggtgctcgagcgcaactacctcgacgtgtac
ccgtacgagaactggtccgggaccgccgtcctgccgcggttcaccgtgggggagcgcttc
gagcccaccgaggccctgctgtccgagggcaagaccacggcgccgagctacctcaccgag
gcggacctcatcgcgctcatggacgccaacggcatcggcaccgacgccaccatggccgag
cacattgaaaagatccaggagcgccagtacgtgcgcaccgtgcctcgcggcgggggcggc
gcgggcgatgccgacgacgggtcgtggccgaggacggggtggtcgtgcggggcggggcgg
ccgcggaggggctccggcggcggcggcggcggatccggagtgcgcgagttcatcccgacc
agccttggggtcgcgctcatcgaagggtttgaccgcatgcgcttcgagaccagcctgggc
aagccgttcctgcgcaaggagatggagctcaagatgaaggccatctgcgaggggcgaacg
acgaagcagctggtgctgagggagagcatcgagggttaccggagggtgtttgagcagtcg
agggcggagctgaacgtgctcaaggcggcctgccgacaggagctcaagcacgtcggcctg
gtcatgtccgccgtcgtcttcggccggccgctgctcgagcagaatgctacgctgcggatt
gaaaccccccgccggatctag
DBGET
integrated database retrieval system
