Remersonia thermophila: 98121966
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Entry
98121966 CDS
T10833
Symbol
VTJ83DRAFT_1190
Name
(RefSeq) hypothetical protein
KO
K15174
RNA polymerase II-associated factor 1
Organism
rthe Remersonia thermophila
Pathway
rthe04011
MAPK signaling pathway - yeast
Brite
KEGG Orthology (KO) [BR:
rthe00001
]
09130 Environmental Information Processing
09132 Signal transduction
04011 MAPK signaling pathway - yeast
98121966 (VTJ83DRAFT_1190)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rthe03021
]
98121966 (VTJ83DRAFT_1190)
Transcription machinery [BR:
rthe03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
98121966 (VTJ83DRAFT_1190)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Paf1
Herpes_UL49_2
DUF3669
Motif
Other DBs
NCBI-GeneID:
98121966
NCBI-ProteinID:
XP_070870543
JGI:
Remth1_1190
LinkDB
All DBs
Position
1:complement(join(4258009..4259360,4259476..4259746))
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AA seq
540 aa
AA seq
DB search
MSSSQSRNGERMIHQDYIARIRYSNALPPPPNPPKLLDIPNTGLASGQYTAPGFASRLAR
EQPLNIEADAELGMPLDLVGMPGVFDGDESSIQAPAQPPSVHPHDRLLLRPLSTLGKPKL
GETAVSFLRRTEYISSVQLKPKAADHIFLKSSSSAAAAKRAEKRKASPEPDKGTPAWIRR
RIERSFEVAAAQLADRARVKHPSKRNLRVVDAFPVLPDLEAFPDSGAYVTVKFSTNPVTA
TDVYDTRLLSGIFKPIERTAAEEQAYEAARAAWERDPSLPKPSQMMNYDLFLPIDAQTGD
NFRAMFDVDRPDRDDRGLYTHKGDLFRFPRVRAYETAQEKEMDHDNKYDEEVILAFRDDE
TAPPRARADDSAQKAVYYYPVMQRTTIRNQRTKNIARTIGIPAADEEEPHLDELHVRVGE
PSDDLKTELLRYKMQPVGDLPEEDDEYDDGNDDDDDNNNNNEGRHRGRRESEGHDLDDAD
GDEQEEHDSHRRRRDYDSDRGSASPSGNGGGRSHDERRYEEEEEEEEEEEEDAEGDEDEE
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcgtcacaatcgcgaaacggcgagcgcatgatccatcaggactacattgcgagg
atacgctactccaatgccctgccgccgcccccgaacccccccaagctgctcgatatcccc
aacacggggctcgccagcggccagtacacggcccccggcttcgcctcgcggctggcccgc
gagcagcccttgaacattgaggccgatgccgagctgggcatgccattggacctcgtcggc
atgcccggcgtttttgatggcgatgagagctccatccaagcgcccgctcagccgccttcc
gtccatccccacgatcgcctcctcctgcgcccgctctccaccctcggcaagcccaagctc
ggcgagaccgccgtctccttcctccgccgcaccgagtacatctcctccgtccagctgaag
cccaaggccgccgaccacatcttcctcaagtcctcctcttctgccgccgccgccaagcgc
gccgagaagcgcaaggcctctcccgagcccgacaagggcacgcccgcctggatccgccgc
cgcatcgagcgcagcttcgaggtcgccgccgcccagctcgccgaccgcgcgcgcgtcaag
cacccctcgaagcgcaacctgcgcgtcgtcgacgccttccccgtgcttcccgacctcgag
gccttccccgattcgggcgcctacgtgacggtcaagttcagcaccaaccccgtcaccgcc
accgacgtctacgacacgcgcctgctctcgggcatcttcaagcccatcgagcgcaccgcc
gccgaggagcaagcctacgaggccgcccgcgccgcctgggagcgcgacccctcgctgccc
aagccctcgcagatgatgaactatgacctcttcctgcccatcgacgcccagacgggcgac
aacttccgcgccatgttcgacgtcgaccgcccggaccgcgacgaccgcggcctctacacc
cacaagggcgacttgttccgcttcccccgcgtgcgcgcgtacgagacggcccaggaaaag
gaaatggaccacgacaacaagtacgacgaggaggtcatcctggccttccgcgacgacgag
acggccccgccccgcgcccgcgccgacgactcggcccaaaaggccgtctactactacccc
gtcatgcagcgcaccaccatccgcaaccagcgcaccaagaacatcgcccgcaccatcggc
atccccgccgccgacgaggaggaaccccacctcgacgagctgcacgtccgcgtcggcgag
cccagcgacgacctcaagacggagctgctgcgctacaagatgcagcccgtcggcgacctt
cccgaggaggacgacgagtacgacgacggcaacgatgacgacgacgacaacaacaacaac
aacgagggacggcaccgcggccggagggagagcgaggggcacgacctggacgatgccgac
ggcgacgagcaggaggagcacgacagccaccggcggcggcgcgactacgacagcgatcgc
ggctcggccagcccgtcgggcaacgggggaggccggagtcatgacgagaggcggtatgag
gaggaggaggaggaggaggaagaagaagaggaggatgccgagggagatgaggatgaggag
tag
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integrated database retrieval system
