Remersonia thermophila: 98121972
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Entry
98121972 CDS
T10833
Symbol
VTJ83DRAFT_1196
Name
(RefSeq) hypothetical protein
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
rthe Remersonia thermophila
Brite
Enzymes [BR:
rthe01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
98121972 (VTJ83DRAFT_1196)
Transfer RNA biogenesis [BR:
rthe03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
98121972 (VTJ83DRAFT_1196)
Prokaryotic type
98121972 (VTJ83DRAFT_1196)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
98121972
NCBI-ProteinID:
XP_070870549
JGI:
Remth1_1196
LinkDB
All DBs
Position
1:join(4277791..4277912,4278160..4278247,4278302..4278592,4278652..4281018)
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AA seq
955 aa
AA seq
DB search
MSSQRRGTHVPSVRLETERSLGIMQRRAAINFAWTGDIRKRYTDFLVNEVNRDGVVLHLF
SFEEQESHTQATAVNRNVTAPLPPPPPPNKPEDKPSTDVGNPENPPKVTAISEDDRKTLV
GLVSETVAEQLIALDEKIQAKKQLDQNERTVTLNSVADRNERAHIHQEIRRIFHSRFETT
ADSNGVITASPAQKKSNSRGSSNRALSQNWISRRENNQRKGKARDAAPGSGPYLHLTLYK
ENKDTMDAINTIARFLKIKASNFGFAGTKDRRAATVQRISVFGQKPSNLIWMNSYIPGVR
VGHFAFAQTSIELGDHGGNEFVITIKNCEPLIGEDCSLPQRMKMIQQSVKCGLAFLKNNG
YINYFGLQRFGTYSIGTHLLGMKILKGDLEGFLDAVLHVDESLLEDVLNTNPSSLLNKDN
QANRDDLNRARAITTWKTTKSAEKALELLPKRFSTEASIIRHLGKNPKDLLGAILSITRG
MRMMYIHAYQSYVWNFVATRRWARFGAKVIEGDLVFVKDAVSSGPVDDENPFAYNDDDYK
QARPLTAEDIASGKYTINDVVLPLPGFDVVYPANEIGDYYAEFMGRPENGSLDPRNMRRK
TRDFSLSGAYRPLIGHFIGEPEFAVVSYHDDTQQLWPTDLDYAIQHKKDQAANNADTAKA
PTASTAEPKAEDGPANRWNSFAQNAAQHDAALEAERRRKADEEPKIDVTVTNETWVQTGL
DGSSKRIKVARHTQAIGTSHPDGPVGDVSGGAPITGASALSGTASFADLVHAHASKAAAG
AVADVPAPTVPTVPAPSSTFDLKKYLEEHASAAERQASAAASQTEAQIMAHASDALKWYM
NKTLEATSGAPKEQVAAPEPMNVEPAKPAETKPAETKPANSGPFEAGRVINGIKVPQLRS
ACENPLAMDGDIDEGSIAPGDDKIAVVLKFRLKVSNYATVVLRELMGTTAEELAH
NT seq
2868 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtctcagcgtcggggcacgcatgtgccatctgtgcgcttggagacagagaggagt
ctcggcatcatgcagcgccgtgctgccatcaactttgcctggactggagacattcgcaag
cgctacacggatttcctggtcaacgaagtgaaccgtgatggcgtcgtgcttcatcttttc
agcttcgaggagcaagaatctcatacccaggctactgctgtcaaccgcaatgtcacggct
ccacttcctcctcctcctcctcccaacaagcctgaggacaagcccagtaccgatgtcggc
aatcccgagaacccgcccaaggttactgcgatctctgaggacgatcgcaagactcttgtc
ggtctggtcagcgagaccgttgccgaacagctcatcgcgctcgacgagaaaatccaggcc
aagaagcagcttgaccagaacgagcgcaccgtgacgcttaactctgttgccgacaggaac
gaacgcgcccacatccatcaggaaattcgccgcattttccactcgcgttttgagacgact
gccgactccaatggcgtcatcacggccagccctgctcagaagaaatccaacagccgcggc
tcttccaaccgggctctgagccagaactggatttcccgccgcgagaacaaccagcgcaag
gggaaggcccgtgatgcggccccgggcagcgggccctacctgcatctcacgctctacaag
gagaacaaggacacgatggatgcgatcaacacgattgctcgtttcctgaagatcaaggcc
tccaactttgggtttgcaggcaccaaggaccgtcgcgccgccaccgtccagcgcatcagc
gtgtttggccagaagccttccaatctgatctggatgaactcgtacattccaggcgttcgc
gttggccattttgcctttgcccagaccagcatcgagctcggcgaccacggaggcaacgag
ttcgtcatcaccatcaagaactgcgagcctctcattggcgaggattgctcgcttcctcaa
cgcatgaagatgatccagcagtcggttaagtgcgggctggccttcctcaagaacaacggc
tacatcaactactttggcctccagcgtttcggtacctatagcatcggcacccacctgctg
ggcatgaagattctcaagggcgacctggaaggtttcctcgacgccgtgctccatgtcgat
gagagccttctcgaggacgttctgaacaccaacccttcttccctcctcaacaaggacaac
caggctaaccgcgacgatctgaaccgcgcccgtgccatcaccacgtggaagaccaccaag
agtgccgaaaaggccctcgagctgcttcccaagcgcttcagcaccgaggcttccatcatt
cgccatctgggtaagaacccgaaggacctgctgggggccatcttgagcatcacccgcggc
atgcgcatgatgtacatccacgcctaccagtcctatgtctggaactttgtcgccacccgc
cgctgggcccggttcggggccaaggtcatcgagggcgatctcgtcttcgtcaaggacgcc
gtttcgagcggtcccgtggacgacgagaaccccttcgcctacaacgacgatgactacaag
caggcccgccctctgacggccgaggacatcgcctccggcaaatacacgatcaacgacgtc
gtcctgcccctgcctgggttcgatgtcgtctaccccgcgaatgagattggcgattactat
gccgagttcatgggccgccctgaaaacggttctctggacccgcgcaacatgcgccgcaag
acgcgcgacttcagcctgtccggcgcgtatcgccctctcatcggccatttcattggcgag
cccgagtttgccgtcgtttcgtaccacgacgacactcaacagctctggccgaccgatctc
gactacgccatccaacacaagaaggaccaggcggccaacaacgcagacacggcaaaggcg
ccgaccgcgtccacggccgagccaaaggccgaagatggccccgccaatcgctggaacagc
tttgcccagaacgctgcccagcacgacgcggccttggaggctgagcgccgccgcaaggcg
gacgaggagcccaagatcgacgtcacggtcaccaacgagacttgggtccagactggcctg
gatggcagctccaagcgcattaaggttgcccggcacacccaggctatcgggacgtctcac
cctgatggcccggttggcgatgtttctggcggcgctcccatcaccggggccagcgccttg
tcgggcactgcttcctttgcggatctggtccacgcccacgcctccaaggctgctgctggt
gccgtcgccgacgtccccgccccgacggtcccgacggtcccggctccgtcttcgaccttc
gacctcaagaagtaccttgaggagcacgccagcgctgccgagaggcaggcttctgccgcg
gcctctcagaccgaggcccagatcatggcccatgcttcggatgccctcaagtggtacatg
aacaagacccttgaggccaccagcggcgctcccaaggaacaagttgcggcgcccgagccg
atgaacgttgagccggccaagcccgcggagaccaagcctgcggagaccaagcccgccaac
tccggtcccttcgaggccggccgggttatcaacggcatcaaggtgcctcagcttcgcagc
gcttgcgaaaacccccttgcgatggacggcgacatcgacgagggcagcatcgccccgggc
gacgacaagatcgccgtcgtcctcaagttccgtctgaaggtcagcaactatgcgaccgtc
gttctccgggagctgatgggcacgacggccgaggagctggctcactaa
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