Remersonia thermophila: 98122092
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Entry
98122092 CDS
T10833
Symbol
VTJ83DRAFT_1303
Name
(RefSeq) hypothetical protein
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
rthe Remersonia thermophila
Pathway
rthe03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
rthe00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
98122092 (VTJ83DRAFT_1303)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rthe03041
]
98122092 (VTJ83DRAFT_1303)
03009 Ribosome biogenesis [BR:
rthe03009
]
98122092 (VTJ83DRAFT_1303)
Enzymes [BR:
rthe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
98122092 (VTJ83DRAFT_1303)
Spliceosome [BR:
rthe03041
]
Complex A
U1 snRNP components
U1 related factors
98122092 (VTJ83DRAFT_1303)
Complex B
98122092 (VTJ83DRAFT_1303)
Ribosome biogenesis [BR:
rthe03009
]
Eukaryotic type
Pre-60S particles
Helicases
98122092 (VTJ83DRAFT_1303)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
GRP
P-loop_SecA
Takusan
Utp25_C
Motif
Other DBs
NCBI-GeneID:
98122092
NCBI-ProteinID:
XP_070870656
JGI:
Remth1_1303
LinkDB
All DBs
Position
1:join(4674821..4674924,4675028..4676247,4676751..4676879,4676946..4677098,4677159..4677223)
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AA seq
556 aa
AA seq
DB search
MSSYGGGYGSRGGGYGGGGYDRNGGGYSNGYGSHGGSNGYSGGGYGGGGGGGYGGGGYGG
GYGGGDRMSNLGAGLQKQNWDLDALPKFEKSFYQEHPNVAARSQAEVDKFRRDHAITVSG
RDVPKPVETFDEAGFPRYVMDEVKAQGFPAPTPIQSQGWPMALSGRDVVGIAETGSGKTL
TYCLPAIVHINAQPLLAPGDGPIVLVLAPTRELAVQIQQEITKFGKSSRIRNTCVYGGVP
KGPQIRDLQRGVEVCIATPGRLIDMLESGKTNLRRVTYLVLDEADRMLDMGFEPQIRKIV
GQIRPDRQTCMWSATWPKEVRALASDFLTDFIQVNIGSMDLSANHRITQIVEVVSESEKR
DRLIRHLEKIMEDKDTQNKILIFTGTKRVADDITRFLRQDGWPALSIHGDKQQNERDWVL
DQFKTGKSPIMVATDVASRGIDVRNITHVLNYDYPNNSEDYIHRIGRTGRAGAKGTAITF
FTTDNAKQARDLVNVLQEAKQHIDPRLADMARYSGGGGSSRYGGYRGRGGGGYRGGGGNR
SSVNGANAMPIGNRRW
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcctacggcggtggttacggctcccgcggcggcggttacggcggcggtggttat
gaccgcaacggcggtggatattctaacggctacggttctcacggcggctccaacggttat
tccggcggcggttacggcggcggcggcggcggtggctacggcggtggtggatatggcggc
ggctacggtggtggcgaccgcatgtccaacctcggtgccggcctccagaagcaaaactgg
gacctggacgcgcttcccaagtttgagaagtcgttctaccaggagcaccccaacgtcgct
gcccggtctcaggcggaagtcgacaagttccgtcgcgaccacgccatcaccgtctcgggg
cgcgatgttcccaagcccgtcgagaccttcgacgaggccggcttccctcgttacgtcatg
gacgaggtcaaggcccagggcttcccggcccccacccccatccagtcccagggctggcct
atggctctttccggacgcgacgtcgttggtattgccgagacgggctctggaaagacgctg
acctactgcctgccggccatcgttcacatcaacgcccagccgctgctcgccccgggcgac
ggccccattgtcttggtcctcgcccccacccgcgagctggctgttcagatccaacaagaa
atcaccaagttcggcaagtcgtctcggatccgcaacacctgcgtttatggcggtgttccc
aagggcccgcagatccgcgacctccagcgtggcgtcgaggtgtgcatcgccacccccggc
cgcctcatcgacatgctcgagtcgggcaagacgaacctccgtcgtgtcacgtacctcgtg
cttgacgaggccgaccgcatgctggacatgggtttcgagccccagatccgcaagatcgtc
ggccagatccgtcctgaccgccagacttgcatgtggtctgctacgtggcccaaggaggtc
cgcgccctggcctccgacttcttgaccgactttatccaggtcaacattggatccatggat
ctgtcggcgaaccaccgcatcacccagattgtcgaggttgtcagcgagagcgagaagcgc
gaccgcctcattcgccacctcgagaagatcatggaggataaggacacccagaacaagatc
ctcatcttcaccggcaccaagcgcgttgccgacgacatcacccgcttcctgcgccaggac
ggctggccggctctttccatccacggcgacaagcagcagaacgagcgcgactgggtcctg
gatcagttcaagaccggcaagagccccatcatggttgccacggatgtcgcctctcgtggt
atcgatgtgcgcaacattactcatgtgctcaactatgactaccccaataactcggaggat
tacatccaccgtattggcagaactggccgtgccggcgcgaaaggcacagccatcaccttc
ttcaccactgacaatgccaagcaggcccgggatcttgtgaacgtgctccaggaggctaag
cagcacatcgatcctcgccttgccgacatggcccgttacagtggtggtggtggcagcagc
cgctatggtggataccggggccgcggcggtggtggttaccgtggcggaggtggtaaccgt
tcgagcgttaatggcgccaacgccatgccgattggcaatcgcaggtggtag
DBGET
integrated database retrieval system
