Remersonia thermophila: 98122107 Help Entry 98122107          CDS       T10833                                  Symbol VTJ83DRAFT_1317 Name (RefSeq) hypothetical protein   KO K12856   pre-mRNA-processing factor 8 Organism rthe  Remersonia thermophila Pathway rthe03040   Spliceosome Brite KEGG Orthology (KO) [BR:rthe00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     98122107 (VTJ83DRAFT_1317)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03041 Spliceosome [BR:rthe03041]     98122107 (VTJ83DRAFT_1317) Spliceosome [BR:rthe03041]  Complex B   U4/U6.U5 tri-snRNP components    U5 snRNP specific factors     98122107 (VTJ83DRAFT_1317)  Complex C    U5 SnRNP specific factors     98122107 (VTJ83DRAFT_1317) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  PROCN PRP8_domainIV U6-snRNA_bdg PRO8NT U5_2-snRNA_bdg RRM_4 PROCT Motif Other DBs NCBI-GeneID:  98122107 NCBI-ProteinID:  XP_070870670 JGI:  Remth1_1317 LinkDB All DBs Position 1:join(4719426..4724072,4724140..4726620) Genome browser AA seq 2375 aa AA seqDB search MSSFPPPPPPPGWGPPPPPPTPPPPGPPPSFPPPPAIPAPPPPGYRPPTDPLTAKFEQKK KEWLRMQRNRFGEKRKGGFVETQKADMPPEHLRKIVKDIGDVSQKKYTSDKRSYLGALKF MPHAVLKLLENMPMPWESAREVRVLYHVNGCLTLVNEIPRVIEPVFFAQWATMWSTMRKE KRDRRLFKRMRFPPFDDEEPPLSWSENIEDVEPLEPIQMELDEEEEAAVYEWFYDHQPLI DTSHVNGPSYKRWNLTLPQMANLYRLSRPLVTDVVDRNYFYLFELKSFFTAKALNVALPG GPRFEPLYKDINPNDEDFGEFNAMDRIIFRNPIRTECRVAYPHLYNSLPRSVHLSWHSHP QIVYTRANDPDLPAFYFDSSINPISSRAVAPKNVKVTHEDELFGPGNIEEPEEETFELPA AVEPFLAEEELATEDTAAAIELWWAPYPFDRRSGRMVRAQDVPLIKHWYLEHCPPKQPVK VRVSYQKLLKTYVLNELHRKRPKSLQKQSLLSTLKQTKFFQQTTIDWVEAGLQVCRQGFN MLNLLIHRKNLTYLHLDYNFNLKPVKTLTTKERKKSRFGNAFHLMREILRLTKLIVDAQV QYRLGNIDAFQLADGIHYAFNHVGQLTGMYRYKYKLMHQIRSCKDLKHLIYYRFNTDAVG KGPGCGFWAPSWRVWLFFMRGIIPLLERWLGNLLSRQFEGRHSKGVAKTVTKQRVESHFD LELRASVMADLMDMMPEGIKQSKVNTVLQHLSEAWRCWKSNIPWKVPGLPAPIENIILRY VKAKADWWISVAHYNRERIRRGATVDKTVAKKNVGRLTRLWLKAEQERQHNHMKDGPYVS SEEAVAIYTTTVHWLESRKFSPIPFPSVSYKHDTKILILALERLREVYSTKGRLNQSQRE ELALIEQAYDSPGTTLERIKRFLLTQRAFKEVGIDMNDNYSTINPVYDIEPIEKISDAYL DQYLWYQADQRHLFPAWVKPSDSEVPPLLVYKWAQGINNLDKVWETANGECNVMIETQLS KVYEKVELTLLNSLLRLIMDHNLADYITAKNNVTLTYKDMSHVNSYGMIRGLQFSAFVFQ YYGLILDLLLLGPQRASEIAGPPQNPNDFLQFQDRETETRHPIRLYTRYIDKIWVFLRFT ADEARDLIQRFLTEQPDPNFENVIGYKSKKCWPRDSRMRLMRHDVNLGRAVFWDLKNRLP RSVTTIEWEDTFASVYSKDNPNLLFSMCGFEVRILPKCRNQNDEFPVKDSVWSLVDNTTR ERTAHAFLQVTEEDIQKFNNRIRQILMSSGSTTFTKIANKWNTALIALFTYYREAAVSTV NLLDTIVKCETKIQTRVKIGLNSKMPSRFPPAVFYTPKELGGLGMISGSHILIPASDKRW SKQTDVGVTHYRAGMSHEEETLIPNIFRYIIPWEAEFIDSQRVWTEYSQKRLEANQQNRR LTLEDLEDSWDRGLPRINTLFQKDRSTLSFDKGFRARAEFKIYQLMKSNPFWWTSQRHDG KLWNLNAYRTDVIQALGGVETILEHTLFKATGFPSWEGLFWERASGFEQSMQFKKLTNAQ RSGLNQIPNRRFTLWWSPTINRANVYVGFQVQLDLTGIFLHGKIPTLKISLIQIFRAHLW QKIHESVVMDLCQVFDQELEALSIESVQKETIHPRKSYKMNSSCADIQLFGSPKWNVTRP SLLFDNKDVIEATTTSKFWIDVQLRYGDYDSHDIERYVRAKYLDYTTDSMSLYPSPTGLM IGIDLAYNLYSAYGQYFPGLKTLIQQAMSKIMKANPALYVLRERIRKGLQLYASEGNQEF LNSQNYSELFSNQIQLFIDDTNVYRVTIHKTFEGNLTTKPINGAIFIFNPRTGQLFLKII HTSVWAGQKRLGQLAKWKTAEEVAALIRSLPVEEQPKQLIVTRKGLLDPLEVNLLDFPNI SIRASELQLPFQAAMKVEKLGDMILRATEPQMVLFNLYDEWLKSISSYTAFSRLILILRA LHVNQDKTKLILRPDKSVITQDHHIWPSLTDEEWIKVEMQLRDLILHDYGKKNNVNVSSL TTSEVRDIILGMEISAPSLQRQQAAEIEKQQQEQQQLTAVTTKTQNVHGEEIIVTTTSQF EQQTFASKTEWRTRAIATSNLRTRANNMYVAPVDSDVDDITYVMPKNILKKFITISDLRV QVAGYLYGASPPDNDQVKEIRCIVMVPQIGGLRNIQLPQHLPQHELLKGMEPLGIIHTMS GNELPYMSAVDVTNHARLIDAHPEAWDKQKTLTVAVAFTPGSVSLSAWALTPQGYTWGAE NKDLGSDHPQGFMTSMGERRQLLLSDKFKGFFLVPDNGKWNYSFMGSAFGGIEKKPVHVK LDTPLPFYSDQHRPVHFSSFNELEDIWVDRQDNFA NT seq 7128 nt NT seq  +upstreamnt  +downstreamnt atgtcttcatttcctccgccgccaccgcctccgggctggggccctccccctccgccgccg actcctcctcccccgggtccgccgccgtcgttccctcctccgccagcgatccctgcgccg cctcccccaggttaccggcctcccaccgatcccttgaccgccaagtttgaacaaaagaag aaggaatggcttcgcatgcagcgcaaccggtttggcgagaagaggaagggagggtttgtt gagacccaaaaggccgacatgccgcctgagcacctgcggaagatcgtcaaggacatcggc gacgtctctcagaagaagtacacgagcgacaagcgcagttacctcggcgccctgaagttc atgccgcatgccgtgttgaagttgcttgaaaacatgcctatgccttgggagtcagctcgc gaggtccgggtcttgtaccacgtcaatggctgcctgactctagtcaacgagatcccacgc gtcatcgagcctgtcttcttcgcgcaatgggcgaccatgtggagcacgatgcggaaggag aagcgcgaccgccggctcttcaagcgcatgcgattcccaccgtttgacgatgaagaaccg cccctttcctggtccgaaaacattgaggatgtcgagcctctcgagcccatccagatggag cttgacgaggaggaagaggcggctgtctacgagtggttttatgaccatcagccgctcatc gacacgtcgcatgtcaacgggccgagctacaagaggtggaacctgacacttccgcagatg gccaacttgtaccgtctgagccgtccgctggtcaccgacgtggtcgaccggaattacttt tacctcttcgagctgaagagcttcttcacggccaaggcgctgaacgtggcgttgcccggc ggccctcgctttgagcccctgtacaaggacatcaacccgaacgatgaggactttggcgaa ttcaacgccatggaccgcatcatcttccggaatcccatccggaccgagtgccgcgtcgct tatcctcacctctataattcgctcccccgaagcgtgcatctgtcctggcattcccaccct caaatcgtgtacacccgagccaacgaccccgacctgcccgcgttctatttcgacagttcc atcaaccccatctcgtcgcgggctgtcgcgccaaagaacgtcaaggtcacccatgaagac gagcttttcggaccagggaacattgaggaacccgaggaggagacgttcgagttgcccgcg gctgttgagccgttccttgccgaggaagagctggccacagaagacactgctgccgctatt gagctctggtgggctccttatccttttgacaggcgatcgggtcggatggtgcgagctcag gatgtccccctcatcaagcattggtaccttgagcattgcccgcccaagcagccggtcaag gttcgagtttcataccaaaagctcctcaagacttacgtcctcaacgagctgcacaggaag aggcccaagtcgctgcagaagcagagccttctcagtacgctgaagcagaccaagttcttc cagcagacgacgatcgactgggtcgaagccggcctccaggtgtgccgacagggcttcaac atgctcaaccttttgattcaccggaaaaacctcacgtatctccacctcgactacaacttc aacttgaagcccgtcaagacattgacgaccaaagagcggaagaagtcgcgattcggaaat gccttccacctgatgcgcgagatcctgcggttgaccaagctcatcgtggatgcccaggtc cagtaccggctcggcaacattgacgcgtttcaacttgctgatggcatccattacgcattc aaccacgtcggacagctgacgggcatgtaccggtacaagtacaagctcatgcaccagatc cgctcctgcaaggacctgaagcacctgatttactaccggttcaataccgacgctgtgggt aaaggtccaggctgcggcttctgggctccatcgtggagagtttggctgttcttcatgcgc ggcatcatcccgctgctcgaacggtggctcggcaacctcctctcacggcagttcgagggt cgtcacagcaagggagtcgccaagactgtgacaaaacagcgcgtcgagtcacatttcgac ctggagcttcgtgcatctgtcatggccgacctgatggacatgatgcccgagggtatcaag cagagcaaggtgaacacggtcctgcagcatctctccgaagcgtggaggtgctggaagagc aacattccgtggaaggttcctggactcccagcgcccatcgagaatatcatccttcgttat gtcaaggccaaggcagactggtggatttcggtcgcgcattacaaccgggagcgcatccgg agaggtgctaccgtcgacaagacagtcgccaagaagaacgttgggcgtctgacgcgtctg tggctcaaggctgagcaggagaggcagcacaaccacatgaaagatgggccctacgtgtcg tctgaggaggctgtcgccatctacacgacgaccgtccattggctcgagtcccgcaagttc tcgcctatccccttcccgagcgtctcgtacaagcacgacaccaagatcctcatcctggcg ctcgagcggctccgcgaagtgtattcaaccaaaggcaggctgaatcaaagccagcgggag gagcttgccctcatcgagcaggcctatgacagcccgggaacgaccctggaacgcatcaag cggttcttgctcacacagcgtgcgttcaaggaggtgggcatcgacatgaacgacaactac agcaccatcaaccccgtttacgacatagagcccatcgagaagatcagcgatgcctatctc gaccagtacctctggtaccaggctgatcagcgccacctcttcccagcctgggtcaagccg tccgactccgaagttccaccccttcttgtctacaaatgggcccaaggcatcaacaacctg gacaaggtctgggagactgcgaacggcgagtgcaatgtcatgatcgagacacagctgtct aaggtctacgaaaaggttgaactgaccctcctcaactcgctgctgcggttgatcatggat cacaacttggcggactacatcacggccaagaacaatgtgaccctgacatacaaggatatg agccacgtcaacagctacggcatgatccgcggccttcaattctcggccttcgttttccag tactacggcctcatccttgaccttcttctcctgggtccccagcgagcgagcgagatcgcc ggcccgccgcagaaccccaacgatttcctccaatttcaggatcgtgagaccgagaccagg catccgatcaggctgtacacccggtacattgacaagatctgggtgttcctgcgcttcact gccgacgaggcgagggatctcattcagcggttcctcacggagcaacctgatcccaacttc gagaatgtcattggctacaagagcaagaagtgctggccgagagattcgcgcatgcgcctg atgcgccacgacgtgaaccttggcagagccgtgttctgggatttgaagaaccgtttgccc cgttccgtcacgacgattgaatgggaagacaccttcgcgagcgtctacagcaaggacaac ccgaacctcctgttctccatgtgcggcttcgaagtccgcatcctgcccaagtgccgcaac cagaacgacgaatttccggtgaaggatagcgtctggtcgctggtggacaacacaacccga gagcggacggcccatgccttccttcaggtgacagaggaagacatccagaagttcaacaac cggattcgccagatcttgatgtcttcgggctcgacgacgttcaccaagattgccaacaag tggaacacggcgctgatcgctctgttcacttactaccgcgaggcggccgtgtcgacagtc aacctgctcgacaccatcgtcaagtgcgagaccaagatccagactcgtgtcaagattggg ttgaactcaaagatgccgtcgcgtttccctcctgccgtcttctacacaccgaaggaactg ggcggtctcggcatgatctcagggtctcatatcttgattcctgcaagtgacaagcgctgg tccaagcagacggatgtcggcgtcacccattaccgagccggcatgtctcacgaagaggag actctgatccctaacatcttccgctacatcatcccctgggaggctgagttcatcgactcg cagcgggtgtggaccgagtactctcaaaagcgtctcgaggccaaccaacaaaacaggcga ctcacgctcgaggatctggaagacagctgggatcgtggtttgccgcgcatcaacaccctg ttccaaaaggatcgcagcaccctgagtttcgacaagggtttccgggctcgggccgagttc aagatctaccagctcatgaagagcaaccccttctggtggaccagccagaggcacgatggc aagttgtggaacctcaacgcttaccggaccgatgtgatccaagcgctcggtggtgtcgag accattctggagcacaccctcttcaaggcaaccggtttcccgtcatgggagggtctcttc tgggaacgggcatcgggcttcgaacagtccatgcaattcaagaagctgaccaacgcgcaa cggtccggtctcaaccaaatccccaaccgacgcttcaccctctggtggtcgccaacgatc aaccgggccaacgtctacgtcggtttccaggtccagcttgacctgacgggcatcttcctg cacggcaagattccgaccctgaagatctccctgatccagatcttccgtgcacatctgtgg cagaagatccacgaatccgtggtgatggacctctgccaggtctttgaccaggaactggag gccctcagcatcgagtcggtgcagaaagaaactattcacccgcgcaagtcgtacaagatg aacagctcgtgcgcggacattcagctctttggcagtcccaagtggaacgtgacccggccg tccctgctcttcgacaacaaggatgtgatcgaggccactacaacgagcaagttctggatc gacgtgcagctccgctacggcgactacgactcccatgacatcgagagatacgtccgtgcg aagtacctcgactacaccacagacagcatgagcctgtacccgtccccgaccggtttgatg atcgggatcgacctcgcctacaacctgtactcggcctacgggcagtacttccctgggttg aagacgctgatccagcaagccatgagcaagatcatgaaggcgaaccctgcgttgtacgtg ctgcgcgaacgcattcgcaagggtctgcagctctatgcttcagagggcaaccaggaattc ctgaactcccagaactactcggagctgttcagcaaccagatccagctgttcatcgatgat accaacgtttaccgggtgacgattcacaagacgttcgagggcaacctgacaaccaagccc atcaacggtgccattttcatcttcaaccccaggactggccagctcttcctcaagatcatc cacaccagcgtctgggccgggcagaagcgtctcggccagcttgcgaagtggaagacggcc gaagaagtggcggcgctgatccggtcacttccagtcgaagagcagccgaaacagctcatt gtgacgcgcaagggtctgcttgatcctctcgaggtcaatctcttggacttcccgaacatc tcgatccgtgcgtcagagcttcagctgccgttccaggctgccatgaaggtggagaaactg ggcgacatgatcttgcgcgccactgagccgcagatggtgctgttcaacctgtatgacgag tggctgaagagcatctcgtcctacacggccttctctcgcctgatcctcatcctgagggct ctgcacgtcaaccaggacaagaccaagctaatcctgcggccggacaagtcggtgatcacg caagatcaccacatctggccctcgctcacggatgaggagtggatcaaggtcgaaatgcag ctgcgtgatctgattctccatgattacggcaagaagaataatgtcaacgtatcgagtctc accaccagtgaagtgcgcgacattatcctaggcatggagatctcggcgccgtctctacag aggcagcaggctgccgagatcgagaagcagcagcaggagcagcagcagctcaccgcggtt acgaccaagacgcagaacgtgcacggcgaggagatcatcgtcaccacaacgtctcagttc gagcagcagacgttcgcatccaagacggagtggcgtacccgggcgatcgccacgtcgaat ctgcgcacgcgagccaacaacatgtatgtggcgccggtggacagcgatgtggatgacatc acatatgtgatgcccaagaacatcctcaagaagttcatcaccatctcggatcttcgggtg caagtggccggctacctgtacggagcgtcgcctccagacaacgaccaggtcaaggaaatc cgttgcattgtcatggtgccgcagatcggcgggctgcgtaacatccagctgccgcaacac ctgccgcagcacgagctcctcaagggtatggaaccgctcggcatcatccacaccatgtcg ggcaacgagctcccgtacatgtcggctgtcgacgtgaccaaccacgcccggctgatcgac gcgcacccggaggcgtgggataagcaaaagacgctcaccgtcgccgtggcgttcacgccc ggcagtgtgtccctctcggcctgggcgctaacgccgcaagggtacacgtggggcgccgag aacaaggatcttggtagcgaccatccccaaggcttcatgacgtccatgggcgagcgccgc cagctgctgctgagcgacaagttcaagggattcttcctcgtgcccgacaacggcaagtgg aactacagcttcatgggcagcgcgtttggtgggatcgagaagaagcccgtccatgtcaaa ctcgacacccccctgcccttctacagcgaccagcaccggccggtgcacttctctagcttc aacgagctcgaggatatctgggttgataggcaggataactttgcctag

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