Remersonia thermophila: 98122109
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Entry
98122109 CDS
T10833
Symbol
VTJ83DRAFT_1319
Name
(RefSeq) hypothetical protein
KO
K10841
DNA excision repair protein ERCC-6
Organism
rthe Remersonia thermophila
Pathway
rthe03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
rthe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
98122109 (VTJ83DRAFT_1319)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rthe03036
]
98122109 (VTJ83DRAFT_1319)
03400 DNA repair and recombination proteins [BR:
rthe03400
]
98122109 (VTJ83DRAFT_1319)
Chromosome and associated proteins [BR:
rthe03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
98122109 (VTJ83DRAFT_1319)
DNA repair and recombination proteins [BR:
rthe03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
98122109 (VTJ83DRAFT_1319)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
HDA2-3
MLPTv-like_HTH
Motif
Other DBs
NCBI-GeneID:
98122109
NCBI-ProteinID:
XP_070870672
JGI:
Remth1_1319
LinkDB
All DBs
Position
1:4737216..4740695
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AA seq
1159 aa
AA seq
DB search
MDSQLRPPSPSGQSIQEPPTAEADQASKPRKASTSSGLDAADAPADDETSALQHLTEDVR
NQDDLERDITLQASRALAEAEDKRDKRRIEKAEKLKTKLEDQLRTQQQKLRSSHSNPTAR
LRIQREIARLEAEIVICDKDIADFTARIEQRNKKDVSADLAQGSGGRLPGETQREYLIRI
GKITPFAALRGPRPEGVHGELADAISDAEDEAIAEELEEKEEADGPCSHQILSAPGFAED
DDISISAVESEFSLRPRKKKKQAKLQVESEEEFEPESSSEAASLESDVSDESDLAGSTRK
RKRGKVIKEKEGKVDLSNIDDGNETVYQARLKDWVERRSRARRRRQEKLGQPFDDGSDGV
EEWFKPSPDQPDHHFENGLKLPGDIYPSLFDYQKTGVQWLAELYAQKVGGIIGDEMGLGK
TVQLISFVAALHYSGKLNKPVIVVAPATVLKQWVNEFHRWWPPLRVSILHSSGSGMLNVR
REAETEDHVDPWEEKKPSRSSPAVRRIVNRVVKHGHVLVTTYAGLQTYGDVLIPVEWGYA
VLDEGHKIRNPNTAITIYCKELRTHNRIILSGTPMQNNLTELWSLFDFVYPMRLGTLVEF
RNKFEVPIKLGGYANATNLDIMTAQKCAETLKDAISPYLLQRLKADVAADLPNKSEKVLF
CKLTAAQRESYELFLKSDDMISILNRTRQSLYGIDILRKICNHPDLLDPRLKDKPGYIWG
DDTKSGKMAVVKSLLPMWKRLGHKTLLFCQGIQMLDIMEAFVRRLDNIQYLRMDGKTPIK
DRQTLVDQFNASPDLDLFLLTTKVGGLGVNLTGANRVIIFDPDWNPSTDVQARERAWRLG
QKKEVTIYRLMTAGTIEEKIYHRQIFKQFLSNKVLKDPKQQTSFNLHDLQDLFSLNSYED
GVTETSEMFKSRDPRSRRAPKQLVIPGQDAPPPMPGKIVNPEGARPDIKDVGETDLRNID
GVAGLETYEDSSSPPPNEDRLMEGIFAKSGVHSTLEHDEIVNGKKPIKADRKILQQEANR
IAAEAARSLQRAGEQARNIPIGTVTWTGEVGEAGRPSNPRRGLPGSGAGSASSSRSGTPM
GRAAEQQNLGVTDFEKMIPVFIKRHGGKVPSKLLVDHFNRYCPTRRQTDAFKLALGKVAE
MEQRGSSMRAIWRLRPGYR
NT seq
3480 nt
NT seq
+upstream
nt +downstream
nt
atggattcccaactacgaccacccagtccatcgggtcaatccatacaggagccaccgaca
gcggaagctgaccaggcgagcaagcctcgcaaagcgagcaccagttcaggccttgatgca
gccgatgcccccgcagatgacgaaacatcggccctccagcacctgaccgaagatgtccga
aaccaggatgacttggaacgagacatcaccctccaagcgagtcgtgccttggcggaagcc
gaggacaaacgagacaaaaggcgcatcgagaaggcagaaaagttgaaaacaaaactcgaa
gatcaactgagaacacaacaacaaaagttgcgctcctcacactccaacccaaccgcgaga
cttcgcatccagcgcgagatcgcgagactcgaggccgaaatcgtgatctgcgacaaggac
atcgccgattttaccgcaagaattgagcagcgcaacaagaaagatgtatcggcggatctt
gctcagggttcaggcggcagacttcctggggagacccagcgagagtaccttattcgaata
gggaaaatcacgccttttgctgcccttcgtggccctcgcccggaaggggtgcacggcgag
ctcgccgacgcgattagtgatgccgaggacgaggccatcgcagaggagctcgaggagaag
gaagaggccgatgggccgtgttctcaccaaatcctgagtgcacctggatttgctgaggac
gatgatatttccatttccgcggtcgagtctgagttctctctccgtccgcgcaagaaaaaa
aagcaggccaagctgcaggtcgagtctgaggaagagttcgagcctgagtcaagttctgag
gcagcgagcctcgagtctgacgtgtcggacgagtctgatttggccggcagcacgcgaaag
cgaaagcgtggaaaggtcatcaaggagaaggaaggcaaggttgacctgagcaacatcgac
gatggtaacgaaaccgtttaccaggcaagactgaaggactgggttgagcgacggagcagg
gcccggcggcgacgacaagaaaagctgggtcaaccgtttgacgacgggtcggacggtgtc
gaagagtggttcaagccatctccggaccagccagaccatcactttgagaacggcctgaag
ctgcctggcgatatttacccttcgctattcgactaccagaagactggtgttcagtggctg
gccgagctgtatgctcaaaaggtcggcggcatcattggcgatgagatgggcctagggaaa
acggtccagttgatatcgttcgtcgccgccctgcactacagcgggaagctcaacaaaccg
gtcattgtcgttgcccccgccacggtcctgaagcaatgggtcaacgagtttcatcgatgg
tggcctcccttgcgcgtctccatcttgcactcctctgggagcggcatgctcaatgtccgt
cgcgaagccgagacggaggatcatgtcgacccgtgggaggagaagaaaccgagcaggtct
agccccgctgtcaggaggatcgtgaaccgggtggtgaagcacggtcatgttcttgtcacc
acctatgccggcctgcagacctatggtgacgtcttgattcccgtcgaatgggggtatgcc
gttctcgacgaaggccacaaaatccgaaacccaaacaccgccatcaccatctactgcaag
gagctccgtacccataaccgcatcatactctcgggcactccgatgcaaaacaatctgacc
gagctgtggtccttgttcgacttcgtctacccaatgcgcctggggacgctggtcgagttc
cgcaacaagtttgaggtccccatcaagctcggaggctacgccaatgccacaaacctggac
attatgactgctcagaagtgtgccgagaccctcaaggatgccatcagcccataccttctc
cagcgcctgaaggcagatgttgcggctgatcttcccaacaagagcgagaaggtcctcttc
tgtaaactcacagccgcccagcgagaatcgtacgagttgttccttaagtcggacgacatg
atctcgattctcaatcggacccggcagtcgttatacggcatcgacatcttgcgcaagatc
tgcaaccatcccgacctcttggacccacggctcaaggataagcccgggtatatttgggga
gatgacaccaagtctggaaagatggctgtggtaaagtcattgcttcccatgtggaagcgg
ctaggacacaaaaccctgcttttctgccagggtatccagatgttggacataatggaggcc
tttgttcgacggctagacaacatccaatatctccggatggacggcaagacgccgatcaaa
gacagacagactctagtggaccagttcaatgcctccccagatcttgaccttttcctcttg
acaaccaaggtcggcggactgggcgtcaacctgacaggcgccaatcgtgtcatcatcttt
gacccagattggaacccttctaccgatgttcaagcgcgggagcgggcttggaggcttggt
caaaagaaggaagtgaccatctaccgattgatgaccgccggaaccattgaagagaagatc
taccaccgccaaattttcaagcagttcctctccaacaaggtcttgaaggaccccaaacaa
caaacctcgttcaacctgcatgacctgcaagacctcttcagcctcaactcgtacgaggac
ggtgtaacggaaacgagcgagatgttcaagagccgggatcccagatcgcgcagggcgccg
aaacagctcgtcatcccaggacaggatgcgcccccgccgatgccggggaaaatcgttaat
ccagaaggagcccggcccgacatcaaagatgtcggggaaacagacctccgaaacattgac
ggtgtcgccggtctcgaaacatacgaagactcgtcctcaccccctccgaatgaggaccgt
ctcatggagggcatatttgcgaaatccggcgttcatagcacactagagcatgacgagatt
gtcaacggcaagaagcctatcaaggcggatcgcaagatcctccagcaggaggccaacagg
atcgccgccgaggctgctcggagtctccagcgcgcgggagagcaggctcgaaacatcccc
atcggtaccgtgacgtggactggcgaggtgggtgaagctggccgcccctccaatcctcga
cgtggtctgccgggttccggggcgggcagtgcgagcagctcgaggtcaggcacgccgatg
ggtagagcagcagagcagcagaatcttggtgtgacggactttgagaagatgatacctgtt
ttcatcaagagacatggcgggaaagtgccttcgaagttgttggtcgatcacttcaatcga
tattgtcccacgcggaggcagacggatgcattcaagctggctttgggcaaggtggccgag
atggaacagcgtggatcgagcatgcgggctatttggaggctgagaccggggtatcggtag
DBGET
integrated database retrieval system
