Remersonia thermophila: 98122160
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Entry
98122160 CDS
T10833
Symbol
VTJ83DRAFT_1365
Name
(RefSeq) hypothetical protein
KO
K14848
ribosome assembly protein RRB1
Organism
rthe Remersonia thermophila
Brite
KEGG Orthology (KO) [BR:
rthe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rthe03009
]
98122160 (VTJ83DRAFT_1365)
Ribosome biogenesis [BR:
rthe03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
98122160 (VTJ83DRAFT_1365)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_RIG_2nd
CAF1C_H4-bd
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
Beta-prop_EIPR1
WDR55
Beta-prop_IFT140_1st
Beta-prop_EML
Beta-prop_TEP1_2nd
EIF3I
ANAPC4_WD40
Beta-prop_WDR75_1st
Beta-prop_HPS5
Beta-prop_WDR19_1st
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_C
MIOS_WD40
Beta-prop_Vps41
WD40_RFWD3
Beta-prop_WDR35_TULP_N
Beta-prop_SCAP
WDR90_beta-prop_4th
Motif
Other DBs
NCBI-GeneID:
98122160
NCBI-ProteinID:
XP_070870718
JGI:
Remth1_1365
LinkDB
All DBs
Position
1:4965847..4967352
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AA seq
501 aa
AA seq
DB search
MAKRTAEEEKATGPLKAGERPDAMDIDDKNDDMGEFEDEFEDEFESEDEIIEAGVDGRPD
AEREAEEAMDVDKSAPETFIVGRTKLEPGQTLTPDPTTYRMLHNLSTPWPCLSFDIVRDQ
LGDNRTVFPATMYTVAGTQADRAQANDNSILVMKFSGLSKMQGADDDDSESSDDDSDEED
SDPILEHKSIPLNSTTNRIRAHQTPSQDPSKPPVTLTAAMTESTNVLIHDITPHLASFDT
PGTVITPQQNKPICTVRAHKSEGYAVDWSPLHAAGRLLTGDNDGLIYMTTRTDGGGFVTD
TRPFQGHTSSVEEIQWSPSEASVFASASVDGTIRVWDVRSKARKPALSMQVSNVDVNVMS
WSRQTTHLLASGDDAGVWAVWDLRQWKPSAGGAAAGTTLQRPSPIASFDFHKEQITSVEW
HPTDDSIVAVSAGDNTVTLWDLAVELDDEESKDTAGVQDVPPQLLFVHYQNLAKEVHWHP
QIPGALVATGEEFSIFRTISV
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagcgcacagcagaggaggaaaaggccaccggccctctcaaggccggcgagcgc
cccgatgccatggacatcgatgacaagaacgacgacatgggcgagttcgaggacgagttc
gaggatgagtttgagagcgaggacgagatcattgaggctggcgtcgatgggaggccagac
gccgagcgcgaggccgaagaggccatggacgtggataagagcgccccggagaccttcatc
gtcggcaggaccaagctcgagccgggccaaaccctcacccccgacccgacaacctaccgg
atgctgcacaacctgagcacgccgtggccctgcctctcgttcgacattgtccgcgaccag
ctcggcgacaaccgcaccgtcttcccggccaccatgtacaccgtggccggcacccaggcc
gaccgcgcccaggccaacgacaactccatcctcgtcatgaagttcagcggcctgagcaag
atgcagggggctgacgacgacgacagcgagtcgagcgacgacgatagcgacgaagaggac
tcggaccccatcctcgagcacaagagcatccccctcaactccaccaccaaccgcatccgc
gcccaccagaccccctcccaggacccttccaagccgcccgtcaccctcaccgccgccatg
accgagtccaccaacgtcctcatccacgacatcaccccgcacctcgcctccttcgacacc
cccggaaccgtcatcaccccgcagcagaacaagcccatctgcaccgtccgcgcccacaag
tccgagggctacgccgtcgactggtcgcctctgcacgccgccggccggctcctgacgggc
gacaacgacggcctcatctacatgaccacccgcaccgacggcggcggcttcgtcaccgac
acccggccgttccagggccacacgtcgagcgtcgaggagatccagtggagcccctccgag
gcgtccgtcttcgcgtccgcctcggtcgacggcaccattcgcgtctgggacgtgcgcagc
aaggcccgcaagcccgcgctgtcgatgcaggttagcaacgttgacgtcaacgtcatgtcg
tggtcgcgccagacgacccatctgctcgcgtcgggcgacgacgccggcgtgtgggccgtg
tgggacctgcgccagtggaagcccagcgccggcggcgccgcggcgggcacgaccctccag
aggccgagcccgatcgcgagctttgacttccacaaggagcagatcaccagcgtcgagtgg
catccgaccgacgacagcatcgtcgccgtctccgccggcgataacaccgttacgctgtgg
gatctggccgtcgagctggacgatgaggagagcaaggatacggctggcgtgcaggacgtg
ccgccgcagctgctgtttgtgcactaccagaacctggccaaggaggtgcactggcatccg
caaataccgggcgcgttggtggcgacgggagaagagtttagcatattccgcaccatcagt
gtatga
DBGET
integrated database retrieval system