Remersonia thermophila: 98122294
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Entry
98122294 CDS
T10833
Symbol
VTJ83DRAFT_1486
Name
(RefSeq) hypothetical protein
KO
K14308
nuclear pore complex protein Nup54
Organism
rthe Remersonia thermophila
Pathway
rthe03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
rthe00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
98122294 (VTJ83DRAFT_1486)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rthe03019
]
98122294 (VTJ83DRAFT_1486)
Messenger RNA biogenesis [BR:
rthe03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
98122294 (VTJ83DRAFT_1486)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup54
Nup54_57_C
Adhesin_P1_N
Nbl1_Borealin_N
DivIVA
DUF745
MG280
Motif
Other DBs
NCBI-GeneID:
98122294
NCBI-ProteinID:
XP_070868026
JGI:
Remth1_1486
LinkDB
All DBs
Position
2:complement(join(105581..105709,105903..106546,106616..106751,106810..106881))
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AA seq
326 aa
AA seq
DB search
MFNSVNRQPGLLGPSSTSLFGVSTQQPQPQQQQQQQQQQPQLQLQQSQQQPNPIPQLGGS
LWQPGSATGYQKSIPDQIKLIMEKWDPQNPNCAFKTYLYNKVDEHTVPLYGPGPLDDPKD
WEEALQHKPAPNFIPVLCAGFPAIIARVALQRRVMVEFNNKLHAINASLDAILSRHDLEH
TVRAFNARRRHAELSKRCLALASRVQVLRNRGYALSGDEDELKQKLAKIDKSIQDPALSA
RMEELWSRLIILRGYADSLKDEIIKPGFAEVDGLDEEVEAKAKKILEDYEKQLQHLKKQV
EEAKKDFEEWEKQHNPAPAPMTAPAS
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atgttcaattcggtgaaccggcagccgggcctgctcggcccgagctcgacatctctgttt
ggagtctcaacgcagcagccgcagccgcaacagcagcaacaacagcagcaacagcaacca
caactacaactacaacaaagccaacaacagcccaatccgatcccccagctgggcggctca
ctatggcagcctggtagcgccacaggctaccagaagtccatcccggaccagatcaaactc
atcatggaaaaatgggacccgcaaaaccccaactgcgccttcaagacgtacctctacaac
aaagtcgacgagcacaccgttcctctgtacggccccggtcccttggacgatcccaaggac
tgggaggaagccctccagcacaagccggcccccaactttattcccgtcctctgcgcgggc
ttccccgccatcatcgcgcgcgtggcgctccagcgccgcgtcatggtcgagttcaacaac
aagctgcacgccatcaacgcgagcctggacgcgatcctgtcgcggcacgacctggagcac
acggtgcgggcgttcaacgcgcgccggcggcacgcggagctgagcaagcgctgcttggcg
ctcgcgtcgcgtgtgcaggtgctgcggaaccggggctacgcgctgagcggggacgaggat
gagctgaagcagaagctggccaagattgacaagagcattcaggacccggcgctgagtgcg
cggatggaggagctgtggagcaggttgatcattttgcgcgggtatgccgatagtttgaag
gatgagattatcaagccggggtttgccgaggtggatgggttggatgaggaggttgaggcc
aaggcgaagaagatcctggaggactacgagaagcagctgcagcacctcaagaagcaggtg
gaggaggccaagaaggatttcgaggagtgggagaagcagcacaacccggcgccggcgccg
atgactgctcctgcaagttga
DBGET
integrated database retrieval system
