Remersonia thermophila: 98122423
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Entry
98122423 CDS
T10833
Symbol
VTJ83DRAFT_1601
Name
(RefSeq) hypothetical protein
KO
K10772
AP endonuclease 2 [EC:
3.1.11.2
]
Organism
rthe Remersonia thermophila
Brite
KEGG Orthology (KO) [BR:
rthe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rthe03400
]
98122423 (VTJ83DRAFT_1601)
Enzymes [BR:
rthe01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
98122423 (VTJ83DRAFT_1601)
DNA repair and recombination proteins [BR:
rthe03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
98122423 (VTJ83DRAFT_1601)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Zn_ribbon_GRF
PDE6_gamma
Motif
Other DBs
NCBI-GeneID:
98122423
NCBI-ProteinID:
XP_070868141
JGI:
Remth1_1601
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All DBs
Position
2:complement(join(557075..557190,557396..558985,559036..559168,559231..559289,559341..559368))
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AA seq
641 aa
AA seq
DB search
MPLRITTWNVNGIRNPFSYQPWRENRSFQAMFDILEADIVVMQETKIQRKDLRDDMVLVP
GWDVYFSLPKYKKGYSGVVIYTRSSQCCPIRAEEGITGVLCPPNSSTMFRNLPEDQQIGG
YPTPDQLSSSIDEQTLDSEGRCVILEFPAFVLIGVYSPAMRDETRVEFRQAYIDAIDARV
RNLVKMGKQVFLCGDLNIIRSDLDTAGLQERLRKEGMTMDEFFSTPSRRFFNHLVFGGYV
VGERDQGREEPVLWDLCREFHPARQGMYTCWETRKNARPGNFGSRIDYVLCTSGIKSWFI
DANIQEGLLGSDHCPVYATISDVVTVDGAEVHIEDVMNPPGMFKGGVRQREWTTKDLLPT
SAKLIPEFDRRRNIRDMFFKKATTPKVSPKPAPSDHQHGLGASETKADTTDSSDPQPGST
AAAPEPSTEAVTPASTASVSSLCASSNRKTASPQKAPPPKRQAESSTLQSRPQKKGKVAL
GRESSSSASGTAQSTLKGFFKPKTPTPGTNGDLADTTTSKQPPKDSDSGSHTDPKSASAA
NKNNTSNSSEDPPKPEGSSTEKVFDPIEAKESWSKLLGKRVLPKCEHGEDCQMLVTKKPG
VNCGRAFFMCARPLGPSGDKEQGTPFRCRTFIWSSDWNSRQ
NT seq
1926 nt
NT seq
+upstream
nt +downstream
nt
atgccgctccgaattacaacatggaatgtcaacggcatacggaacccgttctcctaccag
ccatggcgggagaaccgcagtttccaggccatgttcgatattcttgaagccgacattgtc
gtgatgcaggagaccaagatccagcgcaaggatcttcgtgacgacatggtcttggttcca
ggctgggatgtctacttcagccttcccaagtacaagaaaggatactcgggcgtggtcata
tacactcggtcctcccaatgctgtcccatccgtgctgaagaaggcatcaccggcgtcctt
tgccctccaaactcatcgaccatgttccggaacctgcccgaggaccaacaaatcggcggc
tacccgactcccgaccagctctccagctccattgacgagcagactctcgactcggagggc
cgctgcgtcatcttggagtttccagcctttgttctcattggcgtttacagccccgccatg
cgagatgagacacgggtcgagtttcgccaagcctacatcgacgccatcgatgccagggtg
cggaacctcgtcaagatggggaagcaggtcttcctctgcggcgacctcaacatcatccgc
tccgacctggacaccgccggcctgcaggagcgcctgaggaaagaaggaatgacaatggat
gagttcttctcgaccccctcccggcgcttcttcaaccacttggtgtttggaggctacgtt
gttggggagagagaccagggccgtgaggaacccgttctttgggacctttgcagggagttc
caccccgcccggcagggcatgtacacctgctgggagacgaggaagaacgcgagaccaggg
aactttgggagccgcatcgactacgttctctgcacttcgggcatcaagtcctggttcatc
gacgccaacatccaggagggcctcctgggttctgaccattgccctgtctatgcgaccata
agcgatgttgtcacggtcgacggcgccgaggtccacatagaagacgtcatgaatccccca
ggcatgttcaagggcggcgttcgacaacgagagtggaccacgaaggacctcctgcccacg
tctgccaagctcattcccgagttcgatcgacggcgaaacattcgtgacatgttcttcaaa
aaggccacgacgccaaaggtcagcccgaagccagccccaagtgatcatcaacatggcctg
ggcgcttcggagaccaaagccgacacaaccgacagctccgatccacaaccaggtagcaca
gctgccgcacctgaaccgtctaccgaagcggtaacgccggcgtccacggctagcgtctcg
agcctttgcgcgtcttcaaacagaaagacggcatctccacagaaagctcctcctccaaaa
aggcaggcagagtcctccactctccaaagtcggccccagaaaaagggcaaggtggccctg
ggcagggagagctcaagctcggcctcaggcaccgcgcagagcaccctcaaaggcttcttc
aaacccaagacgccgacgccggggacgaacggcgacctggccgacaccaccacttcaaaa
caaccgccgaaagactctgattctggctctcacacggacccaaagagcgccagcgcagcc
aacaagaacaacacatccaactcttctgaagaccccccaaagcccgaaggttcctccaca
gagaaggtctttgatccgattgaagccaaggagtcatggtctaagctgcttgggaagcgg
gtacttcccaagtgcgagcacggcgaggattgccagatgcttgtcaccaagaagcccggc
gtcaactgtggcagggccttcttcatgtgcgctcgccctctgggcccgtccggcgacaag
gaacaaggaaccccgttccgatgccggacctttatctggagcagtgattggaacagtcgg
caatga
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