Remersonia thermophila: 98122499
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Entry
98122499 CDS
T10833
Symbol
VTJ83DRAFT_1670
Name
(RefSeq) hypothetical protein
KO
K22803
structural maintenance of chromosomes protein 5
Organism
rthe Remersonia thermophila
Brite
KEGG Orthology (KO) [BR:
rthe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rthe03400
]
98122499 (VTJ83DRAFT_1670)
DNA repair and recombination proteins [BR:
rthe03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
98122499 (VTJ83DRAFT_1670)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_15
AAA_29
YGR130C_N
AAA_21
AAA
SPASM
Motif
Other DBs
NCBI-GeneID:
98122499
NCBI-ProteinID:
XP_070868210
JGI:
Remth1_1670
UniProt:
A0ABR4DGT7
LinkDB
All DBs
Position
2:join(781675..782901,782963..783853,783907..783979,784042..784771,784912..785284)
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AA seq
1097 aa
AA seq
DB search
MSDPFRNLRLRGGEASADRSSNDSDEDVPAQPSSRRRVARPARNGQPVDGFQPGAIVRVK
VRNFVTYEEAEFFLGPNLNMVIGPNGTGKSSLVCAICLGLGYSPINLGRATQFSEYVKHG
TDEAEIEIELQRKPEDDENYVVGLCIRREDNNRRYTLNGQRIGHKELMKLMHSLRIQIDN
LCQFLPQDKVAEFAALTPVELLDKTLHAAAPEEMIQWRAELKELFQQQKEGQRSSEKTAE
EIKRLKSRQQHLQTDVDKLREKRAIQDELEKLRKLRMVVRYDMARQKFKEAKARKTETAR
SLKQLERSVAPALETVNKKQDYASKIKLVVSDRKRRLQAAEQAAEAAADQVEAANTTAQH
VVMSVDQEKKNIVEKKQRISAVKKTIRHLEAQHRRTPPEFDAADWNRRIRDENHKLREKD
AEADRINEELRQFDHQRRELGDKFARLKVVRQELNSQEGQLLNQLKRIDPDAARGWEWLQ
ENKGGFEKEVFGPPVLTCSVKDQRYSDHIQSMLQGNDFVCFTVQTKEDHKKLSDQFYRKM
GLSVTIRSSFQPLDAYRPPLPREELANLGFEGYATDYIDGPEPVLAMLCAEKRLHASAVS
LGDVSDEQFDHILRGERLNQFAAGRKLYRIVRRREYGPGAVSTRVQTFNKGRFWTEQAVD
APERDDLERQISDIQDQGRVLAESRNEKARQKREIDEQREAIQRKIDELQEQKNQLQREY
TRWQALPLKIETEQKALEAAQAAHAEARARALELEKQHDKAVLEKARAVLHHHKQIRAMR
EAHQALVEAQLILMEAESDVGALKARNTEVTQQLEKARRELQAVEEELTRQREIAAEAQA
DAVSVLTEDNHEEIRARAAGKTVEDVDSDIQVETAKLDLIQASNPAALEEYEKYAERIET
VEAQHQRQTSTLAELGARIEDIMSRWEPRLDELVAEINDAFSYNFEQISCAGEVAVHKDE
DFDKWAIEIRVKFRENETLQRLDQHRQSGGERAVSTIFYLMALQSMAQAPFRVVDEINQG
MDPRNERMVHERMVEVACREHTSQYFLITPKLLSGLKYDERMRVHTIVSGENVDERGTEK
MDFRRFAGIQRRLAGRA
NT seq
3294 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaccccttccgcaaccttcggctccggggcggcgaggcctcggcggaccgcagc
tccaacgatagcgatgaggacgtcccggcccagccgtcctcgagacggcgggtcgcccgt
ccggcccgaaacggccagccggtcgacgggttccagccgggcgccatcgtccgcgtcaag
gtccgcaactttgtcacctacgaagaggccgagttcttcctcgggcccaacctcaacatg
gtcatcggccccaacggcaccggcaagagctccctggtgtgcgccatctgcttgggcctg
gggtattcccccatcaacctcggccgcgcgacgcagtttagcgagtacgtcaagcacggc
acggacgaggccgagatcgagatcgagctgcagcgcaagcccgaggacgacgaaaactac
gtcgtcgggctttgcatccgacgcgaagacaacaaccggcggtacaccctcaacggccag
cgcatcggccacaaggagctcatgaagctcatgcattcgctccgcatccaaatcgacaac
ctgtgccagttccttccccaggacaaggtcgccgagtttgccgccctcacccccgtcgag
ctgctcgacaagacgctccacgcggccgccccggaggagatgatccagtggcgggccgag
ctgaaggagctcttccagcagcagaaggagggccagcgcagcagcgagaagacggccgag
gaaatcaagaggctgaagagccgccagcagcacctccagaccgatgtcgacaagctgcga
gagaaacgggcgatccaggatgagctcgagaagctccgcaagctgcggatggtggtccgc
tacgacatggcccggcagaagttcaaggaggccaaggcccgcaaaacggaaacggcgcgt
tccctcaagcagctggagcgaagcgtcgcgccggcgctcgagaccgtcaacaagaagcaa
gactatgcctccaagatcaagctggtcgtgtccgatcggaagcgccgcttgcaggcggcc
gagcaagccgccgaagccgccgccgaccaggtcgaggccgccaacaccacagcccagcac
gtcgtcatgagcgtggatcaggagaagaaaaacatcgtggagaagaagcagaggatcagc
gccgtcaagaagaccatccgacacctcgaggcgcagcatcgccgaacgcccccggaattt
gacgcggcggactggaacaggcgaatcagagacgaaaaccacaagctccgcgagaaggac
gccgaggcggacaggattaacgaggagcttcgccagttcgatcatcagcggagagagctc
ggcgacaagttcgcaaggctcaaggtggttcgtcaggagctgaactcccaggaaggccag
ctgttgaaccagctgaagaggatcgaccccgacgctgccaggggctgggagtggctccag
gaaaacaagggcggcttcgagaaggaagtgtttgggcccccggtgctgacatgctccgtc
aaggaccagcgatactcggaccacatccagtccatgctgcaggggaacgactttgtctgc
ttcacggtgcagaccaaggaggaccacaagaagctgagcgaccagttctaccgcaagatg
ggcctctccgtcaccatccgctcatccttccagcccctcgacgcctacaggccgcccctg
ccgagggaagagctcgccaaccttgggttcgaaggctatgccaccgactacatcgacggc
ccggagccggtcctcgccatgctgtgcgccgagaagaggctgcacgcctcggccgtctcg
ctcggcgacgtgtccgacgagcagtttgaccacatcctgcggggcgagcggctcaatcag
ttcgccgcggggcgcaagctgtaccgcatcgttcgtcggcgagagtacgggcccggcgcc
gtgtccacccgcgttcagacgttcaacaagggccggttctggaccgagcaggccgtcgac
gcccccgagagggacgaccttgaaaggcagatttccgacatccaagaccaaggccgcgtc
ctggcggagagccggaacgaaaaggcccggcagaagcgggagatcgacgagcagagggag
gcgatacaacggaaaatcgacgagctgcaggagcaaaagaatcagctccagcgggagtac
acacgatggcaagcgctgcctctcaagatcgagaccgagcaaaaggccctggaggcggcg
caagcagcgcacgcggaagcccgggctcgcgcccttgagctggagaagcagcacgacaag
gcggtgctggagaaagctcgagcggtcctgcaccaccacaagcaaatcagagccatgcgc
gaggcgcaccaggcgctcgtcgaggcgcagctcatcctgatggaggccgagtccgacgtc
ggcgccctcaaagccaggaacacggaggtcacgcagcagctggagaaggcccgacgcgag
ctccaagcggtcgaggaggagctgacgcggcagcgcgaaatcgcggccgaggcgcaagcg
gacgccgtcagcgtgctgaccgaagacaaccacgaggagatacgcgccagggcggcggga
aagacggtcgaggacgtcgactcggacatccaggtcgagacggccaagctcgatctcatc
caggcgagcaacccggccgcgctggaggagtacgaaaagtacgccgagcgcatcgagacg
gtcgaggcgcagcatcagaggcagaccagcacgctggccgagctcggcgccaggatcgag
gacatcatgagccggtgggaaccgaggctggacgagctcgtggccgagatcaacgacgcc
tttagctacaactttgagcagatcagctgcgccggcgaggtggcggtgcacaaggacgag
gattttgacaagtgggccatcgagatccgggtcaagtttcgagaaaacgaaaccctccag
cgcctcgaccagcaccgccaatccggcggcgagcgcgccgtctccaccatcttctacctc
atggccctccagtccatggcgcaggcccccttccgcgtcgtcgacgagatcaaccagggc
atggacccgcgcaacgagcgcatggtgcacgagcgcatggtggaggttgcgtgccgcgag
cacacgagccagtacttcctcatcaccccgaagctgctgtccgggctcaagtacgacgag
aggatgcgggtgcacacgattgttagcggtgagaacgtggatgagaggggcaccgagaag
atggatttccggaggtttgcggggatccagaggaggttagcggggcgggcctag
DBGET
integrated database retrieval system
