Remersonia thermophila: 98122501
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Entry
98122501 CDS
T10833
Symbol
VTJ83DRAFT_1672
Name
(RefSeq) hypothetical protein
KO
K10848
DNA excision repair protein ERCC-4 [EC:3.1.-.-]
Organism
rthe Remersonia thermophila
Pathway
rthe03420
Nucleotide excision repair
rthe03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
rthe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
98122501 (VTJ83DRAFT_1672)
03460 Fanconi anemia pathway
98122501 (VTJ83DRAFT_1672)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rthe03032
]
98122501 (VTJ83DRAFT_1672)
03400 DNA repair and recombination proteins [BR:
rthe03400
]
98122501 (VTJ83DRAFT_1672)
DNA replication proteins [BR:
rthe03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
98122501 (VTJ83DRAFT_1672)
DNA repair and recombination proteins [BR:
rthe03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
Other NER factors
98122501 (VTJ83DRAFT_1672)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC4
Motif
Other DBs
NCBI-GeneID:
98122501
NCBI-ProteinID:
XP_070868212
JGI:
Remth1_1672
LinkDB
All DBs
Position
2:complement(join(787072..789906,789978..790058))
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AA seq
971 aa
AA seq
DB search
MSAAAGAAAAAGTSQPPVQPVKLSLPLVYQQKLFEELRAEDELVVLARGLGLMRLVTNLL
HSYDAAGGNLIVVVGADDRENAWIGEALAEHAAISMTPRARGLTLVNTESASVGAREKLY
AAGGIFSITSRILVVDMLTGMLNPESVTGMIVLHADRVTATSLEAFILRIYRQKNKAGFL
KAFSDNPDPLAAGFSPLAATLRNLFLRKVSLWPRFHVHVAQSLEGKKKAEVVELEVPMTE
SMRAIQNAVMECVEVSIQELKKGNPGLDMEGWNLDSALLKSFDVMVRRQLEPNWHRVSWK
TKQIVGDLTVLRGMLRSVLALDAVSFLQQLDTIHAAHAPAPGSARQTQSPWLFLDAAETI
FSEAKRRVYASAQRPGPDASIDALRPVLEEQPKWAVLADVLDEIDRDLLLEPPARDDSNG
TILIMCSDADTCRQLRDYLQTMHVKPRVENKVEEFYDPERDRPSAAFMMRRKLRSYLRWK
REFAQVSAQLFAENQRAVSGAVDPRLGRRGPPPSKRRRVRGGGAVGAGAGPGRLENGSIA
QYFEKPGEVAELMAEVQITAGEDKEEEEGLEAVRQRDGAAADPLEDMDDYYRLYDMQDLV
VIHPYEGDQDEHVLEEVRPRYIIMYEPDAAFIRRVEVYRSSHNDRNVRVYFLYYGGSVEE
QRYLSAVRREKDAFTKLIKERASMALTLAADAHGAADDPQEAFLRTLNTRIAGGGRLAAP
AATAQPPRVVVDVREFRSPLPSLLHGRGLVVVPCMLTVGDYVLSPTVCVERKSVGDLISS
FKDGRLYAQCEAMFQHYRHPALLIEFDQNKSFTLEPFADLSGSAGSVSAAHAGAADLQGK
LVLLTLAFPKLRILWSSSPYESAEIFERLKSLEGEPDPVAAARAGLDGDEAEGAPSQRPG
GAAPPAFNPVPQDMLANVPGVTPNNMASIALEAENIKEVANMTEDELGPLVGREAARKIC
GFFAKDLLEDG
NT seq
2916 nt
NT seq
+upstream
nt +downstream
nt
atgtcagcagcagcaggagcagcagctgctgctggcacgtcccagccgcccgtgcaaccg
gtcaagctctcgctgccgctggtctatcaacagaagctcttcgaggagctccgcgccgaa
gatgagctcgttgtgctggcgcggggcctgggcctcatgcgcctcgtcaccaacctgctg
cattcgtacgatgccgccggcggcaacttgatcgtcgtcgtgggcgccgacgaccgcgag
aacgcctggatcggcgaggccctggccgagcatgccgccatcagcatgaccccccgcgcc
cggggcctgaccttggtcaacaccgagtccgccagcgtgggcgcccgcgagaagctctac
gccgccggaggcatcttcagcatcacctcgcgcatcctggtggtcgacatgctgaccggc
atgctgaaccccgagtccgtcaccggcatgatcgtgctccatgccgaccgcgtcacggcc
acctcgctcgaggccttcatcctccgcatctaccgccaaaagaacaaggcgggcttcctc
aaggccttttccgacaacccggaccccctcgccgcgggcttctcgcccctggccgccacc
ctgcggaacctgttcctccgcaaggtctcgctgtggccgcgcttccacgtccacgtcgcc
cagtcgctcgagggcaagaagaaggccgaggtcgtcgagctcgaggtccccatgaccgag
tccatgcgcgccatccagaacgccgtcatggagtgcgtcgaggtcagcatccaggagctc
aaaaagggcaacccggggctcgacatggagggctggaacctcgacagcgccctgctcaag
agcttcgacgtcatggtccgccgccagctcgagcccaactggcaccgcgtcagctggaag
accaagcagatcgtcggcgacctgaccgtcctccgcggcatgctgcgctcggtgctggcc
ctcgacgccgtctcgttcctgcagcagctcgacaccatccacgccgcccacgccccggcc
ccggggtccgcccggcagacgcagtccccctggctgtttctcgacgccgccgagaccatc
ttctcggaagccaagcgccgcgtctacgcgagcgcccagaggcccggcccggacgcgagc
atcgacgccctgcggcccgtcctcgaggagcagcccaagtgggccgtcctggccgacgtg
ctcgacgagatcgaccgggacctcttgctcgagccgcccgcccgcgacgactccaacggc
accatcctcatcatgtgctccgacgcggacacgtgccggcagctccgcgactacctgcag
accatgcacgtcaagcccagggtcgagaacaaggtcgaggagttttacgatccggagcgc
gaccggccctcggccgccttcatgatgcgccgcaagctgcgcagctacctccgctggaag
cgcgagttcgcccaggtcagcgcccagctgttcgccgagaaccagcgggccgtctccggg
gccgtcgacccgcgcctcggccggcggggccccccgccgagcaagcggcgccgcgtccgc
ggcggcggggcggtcggcgccggcgccggccccgggcgcctcgagaacgggagcatcgcc
cagtactttgagaagcccggcgaggtggccgagctcatggccgaggtccagatcaccgcc
ggcgaggacaaggaggaggaggaggggctggaggcggtccgccagagggacggcgccgcg
gccgatccgctcgaggacatggacgactactaccggctctacgacatgcaagacctggtc
gtgatccacccctacgagggcgaccaggacgagcacgtcctcgaggaggtcaggccccgg
tacatcatcatgtacgagcccgacgccgccttcatccgccgcgtcgaggtgtaccgctcg
tcgcacaacgaccgcaacgtccgcgtctactttctgtactacggcggctccgtcgaggag
cagcgctacctctcggccgtgcgccgcgaaaaggacgccttcaccaagctcatcaaggag
cgcgcctccatggccctgaccctcgcggccgacgcccacggcgcggccgacgacccgcag
gaggccttcctgcgcaccctcaacacgcgcatcgccggcggcggccggctggcggccccg
gcggcgacggcccagccgccgcgcgtcgtcgtcgacgtccgcgagttccgctcccccctg
ccctccctcctgcacggccgcggcctcgtcgtcgtgccctgcatgctcaccgtcggcgac
tacgtcctcagcccgaccgtgtgcgtcgagcgcaagagcgtcggcgacctcatcagctcc
ttcaaggacggccggctgtacgcccagtgcgaggccatgttccagcactaccggcacccg
gcgctgctcatcgagtttgaccaaaacaagagcttcacgctcgagccgttcgccgacctg
tcgggcagcgcgggcagcgtgagcgccgcccacgccggcgccgccgacctgcagggcaag
ctcgtgctgctgacgctggcgttcccgaagctgaggatcctctggtcgagctcgccctac
gagtcggccgagatctttgagcggctcaagagcctcgagggcgagcccgacccggtcgcg
gcggcgcgcgcgggcctggacggggacgaagcggagggcgcgccgagccagaggcccggc
ggcgccgcgccgccggcgttcaacccggtgccgcaggacatgctggccaacgtccccggg
gtgacgcccaacaacatggcgagcatcgcgctggaggccgagaacatcaaggaggtggcc
aacatgacggaggacgagctgggcccgctggtcggaagggaggcggcgaggaagatttgc
ggcttctttgccaaggatttgctggaggacggctga
DBGET
integrated database retrieval system
