Remersonia thermophila: 98122652
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Entry
98122652 CDS
T10833
Symbol
VTJ83DRAFT_1808
Name
(RefSeq) hypothetical protein
KO
K15163
mediator of RNA polymerase II transcription subunit 12, fungi type
Organism
rthe Remersonia thermophila
Brite
Transcription machinery [BR:
rthe03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
CDK-module
98122652 (VTJ83DRAFT_1808)
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NCBI-GeneID:
98122652
NCBI-ProteinID:
XP_070868348
JGI:
Remth1_1808
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Position
2:complement(join(1298451..1301912,1302007..1303497))
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AA seq
1650 aa
AA seq
DB search
MTSRPSLGVHQRPPQHKLSAPALSTQRPPGAHHQRPLSHAHPQQPPYPPSSPVRRDPALY
DHSSPDLSDVSLAPRLAAQRRGGSRLKLELSHDAIAFSPVLVESPSAVADPSKPFTPSRV
IPTADSSDLGDMSPHLSAHQQPLSVEVDAPLPMPRRPPPFALAPTAAVAAAAPSSREMPP
PPAANPARRDARPKPFAVEPPVAAPRFSKLSGSSAASKPGAALGPPPKTGYADFFPWAGN
HPEDQWSDLVIRQGYYDKPLFPNTETQSAKHVLYPALKHKTGLTALSSVFTAVLGQRRHN
GQITAPSTFKPPPRVTLTDTKREAWLRDLANPAISLRRLSRTIPHGIRGRVLLDQCLAKR
VPTDRAVWLIKCVGANELRATKRKNVSSLVLGGGEARWIKDWTVAVEQFIEHVYFAFDED
DWKAKVHYTTRLAAHLYAEHLLDRDHYSEWLVANLESSPEARLPMWILLTRLYWKDLLRM
RKYGRRLVAALISHHSLIYNHPDKDILRPLLKDLTECIHSLMLTSPENFVSPSTWSKHRD
TIRACLPAGDEARHNAFAAISLRNEQLAVSANRSQPAARHILVRMLDGTLQAPMPPELPA
QCWGISKDKDALARTLLEWCTSLYRPGLAKVYVASRMLQHWSALGLDATMAVLAFLDTDA
CREAATRRSLYHLVSELVRSGAFSVPRYLQWLVARGGIRNPDDISEAGPGPIRLLVEIPP
HALTPSQRELRGGILRRASFSVADEAQDAELAFRHLKHTLGMPLDPDDPLLLQHRRPLSL
KKLAAKIASAGRALKAEIGCWLRASFAAHAQEKEAAGGGQAPDVSPSLFHAVRVVLEAAE
DFAMLGDILKTLAKCSAVEVLAAVADTVNRHFCIFSALGDTQPLFRDLLQRLRVAIQEQN
AALRPLLASLVSLAPRIPGMEDLASQLKKDLALNDRQNPVDMCSPVSDNNVVVRFQDDAA
ELHDEIEKLLAGGSSLDRNTMDRLFQTVVQRLHACWDKAPGKQRAYSSLLGRLRLFNAQH
FDGLMVKWLIFLRTLANRPSILRIFPLLVSVGCLDMASVLATTADLPASQAAGPARPPPG
ASAAAAAAPQVVQLTYRTRYMQEVLQLIAVPLRQDDLLTADEVYRFGILQDQAIRESPKE
VLNLVFLAAAEYWFAREQNDLEALPLESASVQQDLLELLKRLVLRDPAGVARALGGVQTA
CQPVGGWIDNLTTRLLIPTANADTHVMFDRVLELTNEFTLPFCQVKLALSLRSSDQAGGQ
DAAAPERQQSHVELFANAMDKAIGAGNMSWVGMLSYLSPDITQHLRLRAQNRFLDLLPSE
RSQPPSDPALLAQSLLMAENLLAVLDAILRGSPSGARQVPLPPSTVDKLVDLWKLLDAPG
TDDNDNDSSDVASPSFSSPVSALTKCAVLVHWLPLALNYVTLHAHSLDSSKPASEVRAKL
LVACAGLMHVLDAFHLPAEPGVMEMLASAAMPGPAASSSPAAAAAAAQSLSRRVFDLSCL
LVDNLTEDARAACVRAVREAAGGDRRLAYLFSFGAAVPSAGAAGGGNGSDAPYESTSLVL
VHRDATNLASGGGGGGGGNRGGAGGSGGALFSGLLGTPPALWGLDRGNQAGERISAFQYR
RWETLGEPTPNVGENDTAIGLGLFKARRVQ
NT seq
4953 nt
NT seq
+upstream
nt +downstream
nt
atgacctcccggccctccttgggcgtccatcagcgaccgccccagcacaagctgagcgcg
ccggccctctcaacccagcgcccacctggcgcccaccaccaacgtcctctctcccacgcc
cacccccagcagcccccctatcctccttcgtctcccgtccgccgcgaccctgccctctac
gaccactcctcgcccgacctcagcgatgtctccctggccccccggctcgccgcccagcgc
cgcggcggctcgcgcctcaagctcgagctttcgcacgacgccatcgccttctcccccgtc
ctcgtcgagtccccgagcgccgtcgccgacccttccaagccctttaccccgtcgcgagtc
atccccacggccgactcgtccgacctcggcgatatgagccctcacctctcggcccaccaa
cagcccttgagcgtcgaggtcgacgcgccgttgcccatgccccggcgcccgcccccgttc
gccctggcccctaccgctgccgtcgccgccgccgccccgtcgtctcgcgagatgccgcct
cctcccgccgccaacccggccaggagagacgcgcgccccaagcccttcgcggtggagccg
cccgtcgccgccccgcgcttctccaagctgagcggcagctccgccgcgtcgaagccgggc
gccgccctgggcccgccgcccaagacgggatacgccgacttcttcccctgggcagggaac
cacccggaggaccagtggtccgacctggtcatccgccagggatactacgacaagccgctc
ttccccaacaccgagacgcagtcggccaagcacgtcctgtacccggccctcaagcacaag
acgggcctgacggccctctcgtccgtcttcacggccgtcctgggccagcgccggcacaac
ggccagatcacggcgccctccaccttcaaacccccgccccgcgtcaccctcaccgacacc
aagcgcgaggcctggctccgtgacctcgcgaacccggccatctcgctgcgccgcctcagc
cggaccatcccccacggcatccgcggccgggtcctcctggaccagtgcctggccaagcgc
gtcccgaccgaccgcgccgtctggctcatcaagtgcgtcggcgccaacgagctgcgcgcc
accaagcgcaagaacgtcagcagcctggtcctcggcggcggcgaggccaggtggatcaag
gactggaccgtcgccgtcgagcagttcatcgagcacgtctacttcgcgttcgacgaggac
gactggaaggccaaggtccactacaccacccgcctggccgcccacctctacgccgagcac
ctcctggaccgcgaccactactccgagtggctcgtcgccaacctcgaaagcagccccgag
gcccgccttcccatgtggatcctcctgacgcgcctctactggaaggatttgctccgcatg
agaaagtacggtcgccggctggtcgccgccctgatcagccaccacagcctaatctataat
caccccgacaaggacatcctgcgccccctgctcaaggacctgaccgaatgcatccactcc
ttgatgctgaccagcccagagaactttgtgtctccgtcgacctggtccaagcaccgagac
accatccgcgcctgcctccccgccggcgacgaggcccgtcacaacgccttcgcggccatc
agcctccgcaacgagcagctcgccgtgtcggccaaccggtcgcagcccgccgcgcgccac
atcctggtgcgcatgctcgacgggacccttcaagcgcccatgccccccgagctgcccgcc
cagtgctggggcatctccaaggacaaggacgccctcgccaggaccctgctcgagtggtgc
acctctctctaccgccccgggctcgccaaggtctacgtcgcgagccgcatgcttcagcac
tggagcgccctgggcctggacgccaccatggccgtgctcgccttcctcgacacggacgcc
tgccgcgaggccgcgacccgccgctccctgtaccacctcgtcagcgagctcgtccggtcc
ggcgccttctccgttccccgctacctccagtggctcgtcgcccgcggcggcatccggaac
cccgacgacatctcggaagccggcccgggcccgatccggctcctcgtcgagataccgcct
cacgccctcaccccgtcccagcgcgagctccgcggcgggatcctgcgccgcgcgtccttc
agcgtggccgacgaggcgcaggatgccgagctcgccttccgccacctcaagcacacgctg
ggcatgccgttggaccccgacgaccccctgctgctccagcaccgccggcccctctccctc
aagaagctggccgccaagatcgcgtcggccggccgggcgctcaaggccgagatcggctgc
tggctgcgggccagctttgccgcccacgcccaggagaaggaggcggcgggcggcggccag
gccccggacgtctcgccctccctgttccacgccgtccgcgtcgtgctcgaggcggccgag
gacttcgccatgctcggggacatcctgaagacgctcgcaaagtgttcggccgtcgaggtc
ctggccgccgtcgccgacacggtcaaccgccacttttgcatcttctcggccctgggcgac
acccagcccttgttccgcgacctcctgcagcggctccgggtcgccatccaggagcagaac
gcggcgctccgcccgctgctggcctcgctcgtgtccctcgcgccgcgcatccccggcatg
gaggacctcgcctcgcagctcaagaaggacctcgccctcaacgaccgccaaaaccccgtc
gacatgtgctccccggtgtcggacaacaacgtggtggtccggttccaagacgacgcggcc
gagctgcacgacgagatcgagaagctcctggccggcggctcgagcctcgaccgcaacacc
atggaccgcctcttccagacggtcgtgcagcgcctgcacgcctgctgggacaaggccccc
ggcaagcagcgcgcctacagcagcctgctgggccgcctgcgcctcttcaacgcccagcac
tttgacggcctcatggtcaagtggctcatcttcctccgcaccctcgcgaaccgcccgtcc
atcctccgcatcttcccgctgctcgtctcggtgggctgcctcgacatggcgtccgtcctg
gcgacgacggccgacctccccgccagccaggcggcgggtcccgcgcgaccgcctcccggg
gcatcggcggcggcggcggcggctccgcaggtggtgcagctgacgtaccggacgaggtac
atgcaggaggtgctgcagctgatcgccgtgcccctccgtcaagacgacctcctgacggcc
gacgaggtctaccgcttcggcatcctccaggaccaggcgatccgggaatcccccaaggag
gtgctcaacctcgtcttcctcgccgcggccgagtactggttcgcacgggagcagaacgac
ttggaggccctgccgctcgagtcggcctcggtccagcaggacctgctggagctgctcaaa
cgcctcgtgctgcgggacccggccggggtcgcgcgggccctgggcggcgtccagaccgcc
tgccagcccgtcggcggctggatcgacaacctgacgacccggctgctgatccccaccgcc
aacgccgacacgcacgtcatgttcgaccgcgttctggagctcaccaacgagttcaccctg
cccttctgccaggtcaagctggccctgagcttgcggtcgagcgaccaggccggcggccaa
gacgccgccgcccccgagcgccagcagtcccacgtcgagctgtttgccaacgccatggat
aaggccatcggcgcgggcaacatgtcgtgggtcggcatgctgagctacctcagcccggac
attacgcagcacctcaggctacgcgcccagaaccgcttcctcgacctcctgccgtccgaa
cgcagccagccgccctcggacccggccctcctcgcccagagccttctcatggccgagaac
ctgctcgccgtcctggacgccatcctccgcggcagcccctcgggcgcgcgccaggtcccg
cttccgccgtccaccgtcgacaagctcgtcgacctctggaagctcctcgacgcgcccggg
accgacgacaacgacaacgacagcagcgacgtcgcctccccctccttctcctcccccgta
tcggccctgaccaagtgcgccgtcctcgtccactggctacccctcgccctcaactatgtg
acgctccacgcccactccctcgactcgtccaagcccgccagcgaagtccgcgccaagctg
ctcgtcgcctgcgcggggctgatgcacgtgcttgacgctttccacctgccggccgagccg
ggcgtaatggagatgctcgcttccgcggcgatgccagggccggcagcaagctcgtccccg
gccgccgcggccgccgcggcccagtcgctcagccgcagggtgtttgacctatcgtgcttg
ctggtggataacctgaccgaggacgcgcgggcggcatgcgtacgcgccgtgcgcgaagcg
gccggcggggatcggaggctggcgtacctgtttagcttcggcgccgctgtcccttcggcc
ggcgctgctggcggtggcaacggtagcgacgcgccctatgagagcaccagcctggtgctt
gtccatcgcgacgctaccaacctggcctccggtggtggtggcggcggcggcgggaaccga
gggggggcagggggaagcggaggggcgttgtttagcgggctgcttgggacgccgcctgcc
ctgtgggggctggaccgcggcaaccaggccggcgagaggatcagcgcgttccagtaccgc
cggtgggagacgctcggggagccgacgccgaacgtgggggagaatgatacggcgattggg
ttggggttgttcaaagcgcggcgggtacagtaa
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