Remersonia thermophila: 98122742
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Entry
98122742 CDS
T10833
Symbol
VTJ83DRAFT_189
Name
(RefSeq) hypothetical protein
KO
K14779
ATP-dependent RNA helicase DDX52/ROK1 [EC:
5.6.2.7
]
Organism
rthe Remersonia thermophila
Brite
KEGG Orthology (KO) [BR:
rthe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rthe03009
]
98122742 (VTJ83DRAFT_189)
Enzymes [BR:
rthe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
98122742 (VTJ83DRAFT_189)
Ribosome biogenesis [BR:
rthe03009
]
Eukaryotic type
90S particles
Helicases
98122742 (VTJ83DRAFT_189)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
Cas3-like_C_2
ResIII
SDA1_HEAT
Motif
Other DBs
NCBI-GeneID:
98122742
NCBI-ProteinID:
XP_070869542
JGI:
Remth1_189
LinkDB
All DBs
Position
1:649669..651999
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AA seq
776 aa
AA seq
DB search
MDILKVLSRGIKPTQKNKPQPAAALPSAGAAPHPQLFHDAVASRGKKRKRRKTKDDGADD
PHRDADGDASDLDYFAPKKPAAETAPADTEEANKKRKIKLLDEDECRQILRSHRLKFTVL
SETGPADEPHEDEDEDKDEDEDEAPKSKKQKKKEQKEKKNKTAGKQEAKKDDKKPIFPQP
LSAFGELHHSYGVSAKLASNIYAQGFRVPTEVQLGSLPLLLRPETALRRSSTAVPGIERG
ADFLAVAPTGSGKTITFLIPAIDGVLRRRAELGRSADDHVLEAVIVAPTRELATQIVNEG
RKLAIGTGVRVVLMKRTLRLPAEEVEAKGENEDGSSSSSSSEAGSEVGSDNDDESDSGGD
NDGDSDGDSDGDSDGDSDSGKETTTQGTKKPPARVDILVTTPRTLLNFLTAKRGVRRTLP
AVRSLVLDEADVLLDPVFRDQTMGIWRACTHPDAGLTCWSATMASSIEALVTKQLARRVG
RGSSPRPLIRLVVGLKDTAVPNIAHKLVYTATEQGKLLALRQLLHPASSADSGPPLRPPF
LVFTQTIERAQALHDELRYDIPVEAGGSARVAALHSSMPESARSRVMARFRAGEVWVLIT
TDVLARGVDFAGVNGVVNYDVPTSAAGYVHRAGRTGRAGREGGVAVTFYTKDDIPFVKSV
ANVIAASERQAGRTGEAAAVQKWLLDALPDVTKEDRRKLKVRGVESRRSGAGAAAISTQS
KWERQREKRRALAIEASKRRKRQRRAEGGEESESEGGEQGRGGKGAEDEEWSGLED
NT seq
2331 nt
NT seq
+upstream
nt +downstream
nt
atggatatcctcaaggttctctcgcgcggcatcaagccgacgcaaaagaacaagccgcag
ccggccgcggctcttccatcggccggggcggccccccacccgcagctgttccacgatgcc
gtcgcctcgcgaggcaagaagaggaagaggaggaagaccaaggacgacggggccgacgac
cctcaccgcgatgccgacggcgacgccagcgacctcgactactttgcccccaagaagccc
gccgccgagaccgcccccgccgacaccgaagaggccaacaagaagcgcaagatcaagctg
ctcgacgaggacgagtgccggcagatactgcgctcgcaccggctcaagttcaccgtcctc
tcggagacgggcccggccgacgagccgcacgaggacgaggacgaggacaaggacgaggac
gaggacgaagccccgaagagcaagaagcagaagaagaaggaacagaaggaaaagaagaac
aaaaccgcgggcaagcaggaggcgaaaaaggacgacaagaagcccatcttcccgcagccg
ctcagcgcctttggcgagctgcatcacagctacggcgtgtccgccaagctggcgtccaac
atctacgcccaggggttccgcgtgccgaccgaggtgcagctgggcagcctgccgctgctg
ctgcggcccgagacggccctccggcggtcgagcacggcggtgcccggcatcgagcgcggc
gccgacttcctcgccgtcgccccgaccggcagcggcaagaccatcacgttcctgatcccc
gccatcgacggggtgctgcgccgccgcgccgagctgggccgctccgccgacgaccacgtg
ctcgaggcggtcatcgtggcgccgacgcgggagctggccacccagatcgtcaacgagggc
cgcaagctggccatcggcacgggcgtccgcgtcgtgctcatgaagcggacgctgcggctg
cccgccgaagaggtcgaggccaagggcgagaacgaggacggcagcagcagcagcagcagc
agcgaagccggcagcgaggtcggcagcgacaacgacgacgagagcgatagcggcggcgac
aacgacggcgacagcgacggcgacagcgacggcgacagcgacggcgacagcgattcgggc
aaggagacgacaacccaggggaccaaaaagccgcccgcccgcgtcgacatactcgtgacg
acgccgcggacgctgctcaactttttgacggccaagcgcggcgtgcggcggacgctgccg
gccgtccggtcgctcgtgctcgacgaggccgacgtgctcctcgaccccgtgttccgcgac
cagaccatgggcatctggcgcgcgtgcacccacccggacgccgggctgacgtgctggtcg
gcgaccatggcgtcgagcatcgaggcgctcgtcaccaagcagctcgcgcggcgcgtcggg
cgcgggagctcgccgcgcccgctcatccgcctcgtcgtcggcctcaaggacacggcggtc
cccaacatcgcgcacaagctcgtctacacggccaccgagcagggcaagctgctggccctg
cgccagctcctgcacccggcctcgtcggccgactcgggcccgccgctgcgcccgcccttc
ctcgtcttcacgcagaccatcgagcgcgcccaggccctgcacgacgagctgcgctacgac
atacccgtcgaggcgggcggctcggcccgcgtcgcggcgctgcactcgtccatgcccgag
tcggcccggtcgcgcgtcatggcgcggttccgggccggcgaggtgtgggtgctcatcacg
accgacgtgctcgcgcgcggcgtcgactttgccggcgtcaacggcgtcgtcaactacgac
gtgccgacctcggcggccggctacgtgcaccgcgccggcaggacgggccgcgccggccgc
gagggcggcgtcgccgtcaccttttacaccaaggacgacatccccttcgtcaagagcgtc
gccaacgtgatcgcggccagcgagcggcaggccgggcgcacgggcgaggcggccgccgtg
caaaagtggctgctggacgcgctgcccgacgtgaccaaggaggatcgccgcaagctcaag
gtccgcggcgtcgagtcgcggcgcagcggggccggcgcggccgccatctcgacccagagc
aagtgggagcggcagcgcgagaagaggcgggccctggccatcgaggcgagcaagaggcgg
aagcggcagaggcgggccgaagggggcgaggagagcgagtcggaggggggggagcagggc
cgaggcggcaagggagcggaagatgaggagtggagcggcctggaggattga
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