Remersonia thermophila: 98122778
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Entry
98122778 CDS
T10833
Symbol
VTJ83DRAFT_1921
Name
(RefSeq) hypothetical protein
KO
K10752
histone-binding protein RBBP4
Organism
rthe Remersonia thermophila
Pathway
rthe03082
ATP-dependent chromatin remodeling
rthe03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
rthe00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
98122778 (VTJ83DRAFT_1921)
03083 Polycomb repressive complex
98122778 (VTJ83DRAFT_1921)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rthe03036
]
98122778 (VTJ83DRAFT_1921)
Chromosome and associated proteins [BR:
rthe03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
98122778 (VTJ83DRAFT_1921)
Histone modification proteins
HAT complexes
HATB complex
98122778 (VTJ83DRAFT_1921)
HDAC complexes
Sin3A-HDAC complex
98122778 (VTJ83DRAFT_1921)
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
98122778 (VTJ83DRAFT_1921)
PRC2.2
98122778 (VTJ83DRAFT_1921)
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
98122778 (VTJ83DRAFT_1921)
Heterochromatin formation proteins
Other heterochromatin formation proteins
98122778 (VTJ83DRAFT_1921)
Chromatin remodeling factors
NuRD complex
98122778 (VTJ83DRAFT_1921)
NuRF complex
98122778 (VTJ83DRAFT_1921)
NuRF complex (fruit fly)
98122778 (VTJ83DRAFT_1921)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CAF1C_H4-bd
WD40
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EIPR1
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
EIF3I
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
Beta-prop_IFT122_1st
Beta-prop_TEP1_C
Beta-prop_EML
WD_LRWD1
Beta-prop_SPT8
WD40_RFWD3
NBCH_WD40
MIOS_WD40
ANAPC4_WD40
Beta-prop_SCAP
WD40_MABP1-WDR62_1st
SGL
Motif
Other DBs
NCBI-GeneID:
98122778
NCBI-ProteinID:
XP_070868461
JGI:
Remth1_1921
LinkDB
All DBs
Position
2:join(1683869..1683902,1683978..1684031,1684103..1684154,1684218..1684736,1684798..1685458)
Genome browser
AA seq
439 aa
AA seq
DB search
MAPAEIVDDVDVNMDEQDDADMEQRLINEEYKTWKKNSPFLYDMILSTALEWPTLTTQWF
PDVKDVSDKNYTVHRLLIGTHTAEGKPNYLQIAEVELPKFVTPNPRDYDEERGEIGGYGS
KASLPEPPVIKFNITQKMDHPGEVNKARYMPQNPDVIATLAVDGKVLIFDRTKHSLTPTG
TPNPQIELVGHKEEGFGLAWNMHEEACLATGSEDKTVLLWDLKTISGKTLKPARKYTHHN
HIVNDVQYHPIVKHWIGTVSDDLTLQIIDVRRADTTKAAVVARDGHSDAINALSFNPRCE
YLIATASADKTIGIWDLRNLKMKIHTLEGHVDAVTSLQWHPTETSILGSGSYDRRVIFWD
LSRVGEEQTPEDAEDGPPELLFMHGGHTNHLADFSWNLNDPWLVCSAAEDNLLQIWKVAD
AIVNSDNLDMPMDEVDTSD
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atggcgccggcagaaattgtcgacgacgttgacgtcaacatggacgagcaggacgatgcc
gacatggagcagaggctcatcaacgaggagtacaagacgtggaagaagaacagtcccttc
ctctatgacatgattctgagcactgccctggaatggccgaccttgacgacgcaatggttc
cctgatgtaaaggacgtcagcgacaagaattacaccgtccaccgcctgctgattggaacc
cacaccgccgagggcaagcccaactacctccagatcgccgaagtcgagctccccaagttt
gtcacgcctaacccccgcgactacgatgaggagcgcggcgagattggcggctacggcagc
aaggcgtcgctccctgagccgcccgtcatcaagttcaacatcacccagaagatggaccac
ccgggcgaggtcaacaaggctcgctacatgccgcagaatcccgacgtcatcgcgacgctt
gccgtcgacggcaaggtcttgatctttgaccgcaccaagcacagcctgacccccaccggt
accccgaacccgcagatcgagctggtgggccacaaggaggagggtttcggcctcgcctgg
aacatgcacgaggaggcctgcctcgccacgggcagcgaggacaagacggtgcttctgtgg
gatctcaagaccatctcgggcaagacgctcaagccggctcgcaagtatacgcaccacaac
cacatcgtcaacgacgtgcagtaccacccgatagtgaagcactggatcggcaccgtctcg
gacgacctgaccctccagatcattgatgtgcgccgggccgacacgaccaaggctgccgtg
gtggctcgcgacggccatagcgacgccatcaatgctctctcgttcaacccccggtgcgag
tatctcattgcgacggcgtcggccgacaagacgattggcatctgggatctgcgcaacctc
aagatgaagatccacaccctcgagggccacgtcgacgccgtgacgtcgctgcagtggcac
ccgaccgagacgagcatcctcggcagcgggagctacgacaggcgcgtcatcttctgggac
ctcagccgggtcggcgaggagcagacgcccgaggacgccgaggacggacccccggagctc
ctcttcatgcacggcgggcacaccaaccacctcgccgactttagctggaaccttaacgac
ccgtggcttgtttgcagtgcggccgaggacaacttgctgcagatctggaaggtggccgac
gccatcgtcaactcggacaatctggacatgcccatggacgaggttgacacgtccgattag
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integrated database retrieval system
