Remersonia thermophila: 98122819
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Entry
98122819 CDS
T10833
Symbol
VTJ83DRAFT_1959
Name
(RefSeq) hypothetical protein
KO
K15075
DNA repair/transcription protein MET18/MMS19
Organism
rthe Remersonia thermophila
Brite
KEGG Orthology (KO) [BR:
rthe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rthe03036
]
98122819 (VTJ83DRAFT_1959)
03400 DNA repair and recombination proteins [BR:
rthe03400
]
98122819 (VTJ83DRAFT_1959)
Chromosome and associated proteins [BR:
rthe03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
98122819 (VTJ83DRAFT_1959)
DNA repair and recombination proteins [BR:
rthe03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
Other NER factors
98122819 (VTJ83DRAFT_1959)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MMS19_N
MMS19_C
Motif
Other DBs
NCBI-GeneID:
98122819
NCBI-ProteinID:
XP_070868499
JGI:
Remth1_1959
LinkDB
All DBs
Position
2:complement(join(1826544..1827587,1827639..1829234,1829298..1829887,1829948..1830010,1830075..1830221,1830289..1830376))
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AA seq
1175 aa
AA seq
DB search
MAQFKQWALEYVLSDDDTTQGALAKKAAKEIETSRASSTVVGNWAASVQRWMTAAPGDDD
RMDDGDDGSSGDIIARAKALGFLAATLEALDKNTLRSDQVLRLLGFFGAMFSYDHKAGIT
ASAKALRQLCSMKGFKPDMGIKVLEDVCKIKEDFRLQMATTRLELYELFHSLVRDPAVAS
ELKQKHGAACGFAVDLLQLCHSERDPRNLMVWFKTLALLVSDFDPSPEVTEEIFKTFSAY
FPISLRSSATPIGITAEDLKEAVRACFSAHQRLAKHAFPFLLQKLDQGDAVSVPVKVDIL
KTIKACIDKYENPQTSLIPHTNKIWNSLKYEVRNGEVKETIDATLEVLRAIARKYEGPRA
NLAAFSALQEYIDLVFRDCRDDLANPTYTKQAGLLLMTVVTANIRAYLLYNASFVEAIRE
NLRQPKSPAHTRDLLLLINSLLKTRMELFRARHEAHPDDEEGLRGEAPEHLQSLFYDVYL
AAWAVKAKKELASEDKDILKHVIQGLGILVSQQVLQSDGTPALLCSGAVCSEICFLLGTD
IIRPLTLSPREADAANTALEDEAVQSLRTIVSSYRNGYVELARRVKAETTKRGWDSPSEY
TLRALRDLLSRFTYIGASQIPSDIAADAPSEVPYSPLQHFVTLTSTLLEMLPLSSRWPDV
EGGSANSHLISSLHASVIWFRDACSEKYRNVSLAEHADASANWLQEFASLPEDKPPSMGE
LLQEDDPETYTFFLKLGLLTLRRLYRQASSTGASWDERSLVQLSQMATLVVSQLGLGLQT
SCNLVHEAFNYFHPAGQAPASQALPSLARSLLTLGILQGLRPPALAGLYQPGGQAEQLMC
DTSALGTAPTRESDVRAAIGLILANKVPSSSDPAVMQRVFDFWNKWWNDATANASSSTLD
PATFSFHNKLGMHVLAGAAYRQDSRVLALLPTIRQAISSGPHPVARAVAASVSLLVRLND
ILTRANHAVVKALHRQWVYAHLAKPLLQDAQPTGGSGDTAATARCRAAALSIASHCPFAF
YQDDLALLVRLIVLNLSAAGRADSEAAGEEDAWEQALAALGILDSILHHEPDALKGYLRE
VIRGATGAYQACLLPASSSSAGGLPEGERSWPTRAKCRLYALRVLKVIAERIEDRLLVAY
APPTNRMLAVACGDPTRKVRLEAMAARDRWLKFAD
NT seq
3528 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagttcaagcagtgggcgctggaatatgtgctctcagatgatgacaccacccag
ggggcattggccaagaaggccgcgaaagagatcgaaacctctcgggccagcagcaccgtg
gtagggaactgggccgcttcggtccagcggtggatgacagcggcaccaggcgatgacgat
cgcatggacgatggggacgatgggagcagcggcgacatcattgcgagagccaaagctctg
ggcttcctcgctgccacattagaggccctcgataagaacacgctgcgatccgatcaagtc
ctccggctcctgggctttttcggcgccatgttttcctacgaccacaaagccggcatcacc
gcctcggccaaggccttgcgtcagctgtgctctatgaaaggcttcaaacccgatatgggc
atcaaggtgctcgaggacgtttgcaagatcaaggaagactttcggctgcaaatggctacc
accaggctcgagctttacgagctcttccacagcctcgtgcgagacccagccgtggctagc
gagctgaagcaaaagcatggcgcagcatgcggctttgccgtcgacctcttgcagctatgc
cattcggagcgcgacccgaggaacctgatggtctggttcaagaccctcgccttgctggtc
tcggactttgacccctcccccgaggtcaccgaggagatcttcaagaccttctccgcctac
ttccccatttccctgcgaagctccgccacgcctattggcatcacggccgaggaccttaag
gaagccgtgcgagcctgcttctcggcccaccagcgcctggcgaaacacgcgtttccattt
ctccttcagaagcttgaccagggcgacgccgtgtctgtgccagtgaaggtggacattctg
aagacgatcaaggcgtgcatcgacaagtatgagaatccgcagaccagcctcatcccgcac
accaacaagatttggaactctctgaagtatgaggtccgaaacggcgaggtgaaggagacc
atcgatgccaccctcgaggttctccgggccatagcgagaaaatacgaaggacccagggcg
aacctcgccgccttctcggcgctgcaggagtacatcgacctcgtgtttcgggactgccgc
gatgatctcgccaacccgacctacacgaagcaggcgggcctgctcttgatgacggtggtc
acggctaacatcagggcctatctgctctacaacgccagcttcgtcgaggccatccgtgaa
aacctccgtcagccgaaatccccagcgcacacacgcgacctcctcctcctcatcaactcc
ctgctcaagacgcggatggagctgttccgcgctaggcatgaagcacatccggatgacgaa
gaaggcctccgcggcgaagccccggagcaccttcagtcgctcttctacgacgtttatctt
gctgcgtgggccgtcaaggccaagaaggagctggcttctgaggacaaggacatcctgaaa
cacgtaatccaggggcttgggatcctggtcagccagcaggtcctacaatccgatggaact
cccgccttgctatgctcaggtgccgtatgctccgagatatgcttccttctgggcacggac
atcataagacccctgacgctgagccctcgcgaggccgatgctgccaacacggcgctcgag
gacgaggcggttcagtccttgcgcaccatcgtctcaagctacaggaacgggtacgtcgag
cttgcgcgtcgcgtcaaggcggaaaccacaaaacgcggctgggacagcccctccgagtac
acccttcgcgcgctccgagatctcctctcccgtttcacctacatcggggcgtcgcaaata
ccctccgacatcgcagcggatgctccttctgaggtgccatactcgccgctgcagcacttc
gttacgctcacctcgacgctcttggagatgcttcccctttcctcacgctggccggatgtt
gaaggagggtccgccaactctcacctcatctcgtctctccacgcttctgtgatctggttc
cgcgacgcctgttccgaaaagtatcgcaacgtgtcgcttgcagagcacgccgacgcttct
gccaactggctgcaagagtttgccagcctccccgaggacaagccacccagcatgggcgag
ttgctccaggaggacgatccggagacctacaccttcttcctgaagctcggtttgcttacc
ctgagacgcctgtaccggcaggcgtcctcgacaggggcgtcatgggacgagcggagtctt
gtgcagctctcccagatggccacgcttgtcgtgtcccagctggggctaggcctgcaaacg
tcctgcaacctggtccacgaggcgttcaattacttccatcctgccgggcaggctcccgcc
tcacaagccttgccaagccttgcgagaagcttgttgacgctcggcattctccaagggctg
cggccgccagcgctggccggcctgtaccagcccggcggccaagcagaacagctcatgtgc
gacacgtccgcgttgggaaccgctccgacgcgcgagagcgatgttcgggcagccatcggc
ctcatcctcgcgaacaaagtcccgagctcctcagacccggccgtcatgcagcgcgtcttc
gacttctggaacaagtggtggaacgacgccaccgccaacgcttcctcttcaaccctcgac
cccgccaccttctccttccacaacaagctcggcatgcacgtcctcgccggcgccgcttac
cgccaggattcccgcgtcctcgcgctgctccccaccatccgtcaagccatcagcagcggg
ccccacccggtcgctcgtgccgttgctgcgtccgtcagcctcctcgtcaggttgaatgac
atcctcacgcgggcgaaccatgccgtggtcaaagccctccacaggcagtgggtctatgcc
cacctggccaaaccgctgctgcaggacgcccagccgaccggcggctccggggacacggca
gctaccgctcggtgtcgagccgctgcgctgtccatcgccagccactgtccgtttgcgttt
taccaagatgacctggcgctgctcgtgcggctgatcgtcctcaacctgagcgccgccggc
cgcgcggactccgaggcggcgggagaagaggacgcgtgggaacaagcgctcgcggcgctc
gggatcctcgacagcatccttcaccacgagcccgacgcactgaaggggtacctgagggag
gtgattcgcggcgcgacgggggcgtatcaggcatgccttctcccggcatcgtcgtcatct
gctggcggcctgcctgaaggcgagcgaagctggccgacgcgggccaagtgccgcctgtac
gcgctgcgggtgctcaaggttatcgcggagaggatcgaagaccggcttctggtggcgtat
gcgccgcccaccaacaggatgttggcggtggcgtgcggggatccgacgaggaaggtgagg
ctggaggccatggcggcgagggacaggtggttgaagtttgcggattag
DBGET
integrated database retrieval system
