Remersonia thermophila: 98122848
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Entry
98122848 CDS
T10833
Symbol
VTJ83DRAFT_1985
Name
(RefSeq) hypothetical protein
KO
K10755
replication factor C subunit 2/4
Organism
rthe Remersonia thermophila
Pathway
rthe03030
DNA replication
rthe03410
Base excision repair
rthe03420
Nucleotide excision repair
rthe03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rthe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
98122848 (VTJ83DRAFT_1985)
03410 Base excision repair
98122848 (VTJ83DRAFT_1985)
03420 Nucleotide excision repair
98122848 (VTJ83DRAFT_1985)
03430 Mismatch repair
98122848 (VTJ83DRAFT_1985)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rthe03032
]
98122848 (VTJ83DRAFT_1985)
03036 Chromosome and associated proteins [BR:
rthe03036
]
98122848 (VTJ83DRAFT_1985)
03400 DNA repair and recombination proteins [BR:
rthe03400
]
98122848 (VTJ83DRAFT_1985)
DNA replication proteins [BR:
rthe03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
98122848 (VTJ83DRAFT_1985)
DNA Replication Termination Factors
ELG1-RFC complex
98122848 (VTJ83DRAFT_1985)
Chromosome and associated proteins [BR:
rthe03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
98122848 (VTJ83DRAFT_1985)
DNA repair and recombination proteins [BR:
rthe03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
98122848 (VTJ83DRAFT_1985)
Check point factors
HRAD17(Rad24)-RFC complex
98122848 (VTJ83DRAFT_1985)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
Rad17
DNA_pol3_delta2
RCF1-5-like_lid
RuvB_N
AAA_22
AAA_11
AAA_28
AAA_16
Mg_chelatase
AAA_assoc_2
AAA_19
AAA_14
TPM_phosphatase
AAA_7
AAA_24
SLFN-g3_helicase
AAA_30
DUF4863
DUF815
AAA_5
ResIII
bpMoxR
DNAX_ATPase_lid
AAA_3
Nakanori
RNA_helicase
Peptidase_C47
nSTAND3
TrAA12
Motif
Other DBs
NCBI-GeneID:
98122848
NCBI-ProteinID:
XP_070868525
JGI:
Remth1_1985
LinkDB
All DBs
Position
2:join(1929756..1929874,1929956..1930034,1930109..1931122)
Genome browser
AA seq
403 aa
AA seq
DB search
MSNFFDLKARKAAAANGTASSSADKKDDGHGRVQPWVEKYRPKTLSDVTAQDHTVTVLQR
TLQASNLPHMLFYGPPGTGKTSTILALAKELFGPEMMRSRVLELNASDERGISIVREKVK
DFARAQLTNPPAGYKARYPCPPFKLIILDEADSMTHDAQSALRRTMETYSKITRFCLICN
YVTRIIDPLASRCSKFRFKSLDQGNARRRLEDIARLEGVPLEDGAVDAMIRCSEGDLRKA
ITFLQSAARLVGTSNGTGNGNGNGDGGGGGGGGGGGGDDGADPDRMDVDRRAVTVRVVEE
IAGVIPDATIQKLLQAMRPRAVGETYQAIAKVVDEMVADGWSAGQTMTQLHRAVVYDETI
PDAQKNRIVMVFSEIDKRLVDGADEHLSILDLALRVSGIMAGR
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atgtccaatttcttcgacctcaaggcccgcaaggcggccgctgccaacggcacggcctcc
agcagcgccgacaagaaggacgacggtcatggccgcgtacaaccttgggtcgagaaatac
cgacccaagaccctgagcgatgtgacagcccaagaccacaccgtcaccgttctgcagagg
acgctgcaagcctccaacctcccccatatgctcttttacggccctcccggcaccggcaag
acgtccaccatcctcgccctcgccaaggagctcttcggcccggagatgatgcggtcccgc
gtcctcgagctcaacgcgtccgacgagcgcggcatctccatcgtgcgcgaaaaggtcaag
gactttgcccgcgcccagctcaccaacccccccgccggctacaaggcccgctacccctgt
ccgcccttcaagctcatcatcctcgacgaggccgacagcatgacccacgacgcccagagc
gccctgcgccgcaccatggagacgtacagcaagatcacgcgcttctgcctcatctgcaac
tacgtgacgaggatcatcgacccgctcgccagccgctgctccaagttccgcttcaagagc
ctcgaccagggcaacgcccgccgccgcctcgaggacattgcccgcctcgagggcgtgccg
ctcgaggacggcgccgtggacgccatgatccgctgcagcgagggcgatctgcgcaaggcc
atcacgttcctccagagcgcggcgaggctggtaggcaccagcaacggcaccggcaacggc
aacggcaacggcgacggtggtggtggcggcggcggcggcggcggtggcggcgacgacggg
gccgatccggacaggatggacgtggacaggcgcgccgtgacggtccgcgtggtggaggag
atcgcgggcgtgatccccgacgccacgatccagaagctgctgcaggccatgcgccctcgc
gccgtgggcgagacgtaccaggccatcgccaaggtggtggacgagatggtggcggacggc
tggagcgccggccagaccatgacgcagctgcaccgggccgtcgtgtacgacgagaccatc
ccggacgcgcagaaaaacaggatcgtcatggtgttctccgagatcgacaagcgcttggtg
gatggggcggacgagcacttgtccatcttggatttggccctgagggtgtcggggatcatg
gcggggaggtag
DBGET
integrated database retrieval system
