Remersonia thermophila: 98122913
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Entry
98122913 CDS
T10833
Symbol
VTJ83DRAFT_2042
Name
(RefSeq) hypothetical protein
KO
K12844
U4/U6 small nuclear ribonucleoprotein PRP31
Organism
rthe Remersonia thermophila
Pathway
rthe03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
rthe00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
98122913 (VTJ83DRAFT_2042)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rthe03041
]
98122913 (VTJ83DRAFT_2042)
Spliceosome [BR:
rthe03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
98122913 (VTJ83DRAFT_2042)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nop
Prp31_C
Motif
Other DBs
NCBI-GeneID:
98122913
NCBI-ProteinID:
XP_070868582
JGI:
Remth1_2042
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Position
2:join(2122244..2122564,2122677..2124182)
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AA seq
608 aa
AA seq
DB search
MSTLADELLQDFEASGSEAGGDEADDGFFDAAGVPGGAHTNGDDTAMEELRDEDDDEDAE
MADEGGSAVPAADDDDARAKIEKMQLGGVQDVRSVAVLMKTLTPVLEKIAHYQSQPAASV
ENVGNVEDHPEYHLLTQSNSLSTQIDNEIMLVHKFIRDHYSVRFPELETLITNPLEYAKV
VAILGNGPMDSESIKSLQLSTNNPLGVTLKSVLDGPSLMIVTVEATTSKGQAMPPDQLQR
VVQACEMVIALDKAKKTLTEYVQSRMNIFAPNLTALIGSLTAAQLLNQAGGLTGLSKTPA
CNLPAWGSKKQASAALATNVGIRHQGFIYQSPVIRSIPADLKKQAIKMFANKVVMCARTD
CFHQFRDGSEGERLKDECLDRLDKLQQKPLSKSARALPAPDDKPSRKRGGRRARKAKEAT
AMTELAKAQNRVAFGKEEKEVGYGVGDSTKGLGMIGLRDDGRLRVAQIDNRTRAKLSAKS
KGWGGASSLNSGAASSLRGLAGGGGVTNLSLASSKGLRTSGVGTTLGSATATAGTVSSLA
FSSGQGLELVDPKVQAELTRKRKAEEDRWFKSGAFTQIGGGSSGSGNDGFKKPPLPPSKR
QDTGATKS
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaccctcgccgacgagctcctccaggacttcgaggcctccgggtccgaggcggga
ggcgacgaggccgatgacggcttcttcgatgccgctggcgtccccggcggagcccacacc
aacggagacgacacggccatggaggagctgcgagacgaagatgacgacgaagacgccgag
atggcggacgagggcggcagcgccgtgccggcggccgacgacgatgacgcaagggccaag
atcgaaaagatgcagctcggaggcgtccaagatgtgcgcagcgtcgccgtcctcatgaag
acgttgacgcccgtcctcgagaaaatcgcacactaccagtcgcagcccgccgcgtccgtc
gagaacgtcggcaacgtggaggaccaccccgagtaccacctcctgacgcagtccaacagc
ctgtcgacgcagatcgacaacgaaatcatgctcgtccacaagttcatccgagaccactac
tcggtccggtttcccgagctcgagacgctcatcaccaacccgctggagtacgccaaggtg
gtcgccatcctcggcaacgggcccatggactcggagagcatcaagtccctgcagctgtcc
accaacaacccgctcggcgtgacgctcaagtcggtgctcgacgggccgtcgctcatgatc
gtcacggtggaggccaccacgtccaagggccaggccatgccgccggaccagctccagcgc
gtggttcaggcctgcgagatggtgattgcgctcgacaaggcgaaaaagaccttgaccgag
tacgtgcagtcgcgcatgaacatcttcgccccgaacctgacggccctgatcggctcgctc
acggccgcccagctgctgaaccaggccggcggcctcacgggcctctccaagacgcccgcg
tgcaacctcccggcgtggggctccaagaagcaggccagcgcggccctggcgaccaacgtc
gggattcggcaccagggcttcatctaccaatcccccgtgatccgcagcatccccgccgac
ctcaagaagcaggccatcaagatgtttgccaacaaggtggtcatgtgcgcccgcaccgac
tgcttccatcagttccgcgacggctccgagggcgagcggctcaaggacgagtgcctcgac
cgtctggacaagctgcagcaaaagccgctgagcaagtcggctcgcgcgctgccggcgccc
gatgacaagccgagcaggaagcgcggcggccgccgcgcgcgcaaggccaaggaggccacg
gccatgacggagctcgccaaggcgcagaaccgcgtcgcctttggaaaggaggagaaggag
gtcggctacggcgtcggcgacagcaccaagggcctggggatgatcggcctgcgcgacgac
ggccgcctccgcgtcgctcagatcgacaaccgcacgcgcgccaagctgagcgccaagagc
aagggctggggcggcgcgagctcgctcaacagcggagccgcctcgtcgctgcggggcctg
gccggcggcggcggcgtgacgaacctgagccttgccagcagcaagggcctgcgaacctcg
ggggtggggacgacgctgggctcggccacggccacggcgggcaccgtgtcctcgctcgcg
ttcagctcgggccagggtctggagctggttgaccccaaggtccaggccgagctcacgcgg
aagaggaaggccgaggaggatcggtggttcaagagcggcgcgtttacgcagatcggcgga
gggtcgagcggcagcgggaacgacggcttcaagaagccgccattgccgcccagcaagagg
caggacacgggggcgaccaagtcatag
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